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PPP4R1-AS1 (PPP4R1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PPP4R1-AS1
LocusID (NCBI) 101927323
Atlas_Id 72155
Location 18p11.22  [Link to chromosome band 18p11]
Location_base_pair Starts at 9614807 and ends at 9619363 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPP4R1-AS1   51112
Cards
Entrez_Gene (NCBI)PPP4R1-AS1  101927323  PPP4R1 antisense RNA 1
Aliases
GeneCards (Weizmann)PPP4R1-AS1
Ensembl hg19 (Hinxton)ENSG00000263627 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263627 [Gene_View]  chr18:9614807-9619363 [Contig_View]  PPP4R1-AS1 [Vega]
ICGC DataPortalENSG00000263627
TCGA cBioPortalPPP4R1-AS1
AceView (NCBI)PPP4R1-AS1
Genatlas (Paris)PPP4R1-AS1
WikiGenes101927323
SOURCE (Princeton)PPP4R1-AS1
Genetics Home Reference (NIH)PPP4R1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PPP4R1-AS1  -     chr18:9614807-9619363 +  18p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP4R1-AS1  -     18p11.22   [Description]    (hg19-Feb_2009)
EnsemblPPP4R1-AS1 - 18p11.22 [CytoView hg19]  PPP4R1-AS1 - 18p11.22 [CytoView hg38]
Mapping of homologs : NCBIPPP4R1-AS1 [Mapview hg19]  PPP4R1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX108181 HY048010
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP4R1-AS1
Cluster EST : UnigeneHs.151204 [ NCBI ]
CGAP (NCI)Hs.151204
Alternative Splicing GalleryENSG00000263627
Gene ExpressionPPP4R1-AS1 [ NCBI-GEO ]   PPP4R1-AS1 [ EBI - ARRAY_EXPRESS ]   PPP4R1-AS1 [ SEEK ]   PPP4R1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PPP4R1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927323
GTEX Portal (Tissue expression)PPP4R1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPP4R1-AS1
DMDM Disease mutations101927323
Blocks (Seattle)PPP4R1-AS1
Human Protein AtlasENSG00000263627
Protein Interaction databases
FunCoupENSG00000263627
BioGRIDPPP4R1-AS1
STRING (EMBL)PPP4R1-AS1
ZODIACPPP4R1-AS1
Ontologies - Pathways
Huge Navigator PPP4R1-AS1 [HugePedia]
snp3D : Map Gene to Disease101927323
BioCentury BCIQPPP4R1-AS1
ClinGenPPP4R1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927323
Clinical trialPPP4R1-AS1
Miscellaneous
canSAR (ICR)PPP4R1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP4R1-AS1
EVEXPPP4R1-AS1
GoPubMedPPP4R1-AS1
iHOPPPP4R1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:37:09 CEST 2017

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