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PPY2P (pancreatic polypeptide 2, pseudogene)

Identity

Alias_namesPPY2
pancreatic polypeptide 2
Other alias
HGNC (Hugo) PPY2P
LocusID (NCBI) 23614
Atlas_Id 77229
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 28247444 and ends at 28248289 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PPY2P   9328
Cards
Entrez_Gene (NCBI)PPY2P  23614  pancreatic polypeptide 2, pseudogene
AliasesPPY2
GeneCards (Weizmann)PPY2P
Ensembl hg19 (Hinxton)ENSG00000265060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265060 [Gene_View]  chr17:28247444-28248289 [Contig_View]  PPY2P [Vega]
ICGC DataPortalENSG00000265060
TCGA cBioPortalPPY2P
AceView (NCBI)PPY2P
Genatlas (Paris)PPY2P
WikiGenes23614
SOURCE (Princeton)PPY2P
Genetics Home Reference (NIH)PPY2P
Genomic and cartography
GoldenPath hg38 (UCSC)PPY2P  -     chr17:28247444-28248289 +  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPY2P  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblPPY2P - 17q11.2 [CytoView hg19]  PPY2P - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIPPY2P [Mapview hg19]  PPY2P [Mapview hg38]
OMIM606638   
Gene and transcription
Genbank (Entrez)AF085945 AF222903
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPY2P
Cluster EST : UnigeneHs.744962 [ NCBI ]
CGAP (NCI)Hs.744962
Alternative Splicing GalleryENSG00000265060
Gene ExpressionPPY2P [ NCBI-GEO ]   PPY2P [ EBI - ARRAY_EXPRESS ]   PPY2P [ SEEK ]   PPY2P [ MEM ]
Gene Expression Viewer (FireBrowse)PPY2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23614
GTEX Portal (Tissue expression)PPY2P
Human Protein AtlasENSG00000265060-PPY2P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRI7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRI7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRI7
Splice isoforms : SwissVarQ9NRI7
PhosPhoSitePlusQ9NRI7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PPY2P
DMDM Disease mutations23614
Blocks (Seattle)PPY2P
SuperfamilyQ9NRI7
Human Protein Atlas [tissue]ENSG00000265060-PPY2P [tissue]
Peptide AtlasQ9NRI7
HPRD09437
IPIIPI00026909   IPI00790389   IPI00868884   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRI7
IntAct (EBI)Q9NRI7
FunCoupENSG00000265060
BioGRIDPPY2P
STRING (EMBL)PPY2P
ZODIACPPY2P
Ontologies - Pathways
QuickGOQ9NRI7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPPY2P
Atlas of Cancer Signalling NetworkPPY2P
Wikipedia pathwaysPPY2P
Orthology - Evolution
OrthoDB23614
GeneTree (enSembl)ENSG00000265060
Phylogenetic Trees/Animal Genes : TreeFamPPY2P
HOVERGENQ9NRI7
HOGENOMQ9NRI7
Homologs : HomoloGenePPY2P
Homology/Alignments : Family Browser (UCSC)PPY2P
Gene fusions - Rearrangements
Tumor Fusion PortalPPY2P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPY2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPY2P
dbVarPPY2P
ClinVarPPY2P
1000_GenomesPPY2P 
Exome Variant ServerPPY2P
ExAC (Exome Aggregation Consortium)ENSG00000265060
GNOMAD BrowserENSG00000265060
Genetic variants : HAPMAP23614
Genomic Variants (DGV)PPY2P [DGVbeta]
DECIPHERPPY2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPY2P 
Mutations
ICGC Data PortalPPY2P 
TCGA Data PortalPPY2P 
Broad Tumor PortalPPY2P
OASIS PortalPPY2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPPY2P
BioMutasearch PPY2P
DgiDB (Drug Gene Interaction Database)PPY2P
DoCM (Curated mutations)PPY2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPY2P (select a term)
intoGenPPY2P
Cancer3DPPY2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606638   
Orphanet
DisGeNETPPY2P
MedgenPPY2P
Genetic Testing Registry PPY2P
NextProtQ9NRI7 [Medical]
TSGene23614
GENETestsPPY2P
Target ValidationPPY2P
Huge Navigator PPY2P [HugePedia]
snp3D : Map Gene to Disease23614
BioCentury BCIQPPY2P
ClinGenPPY2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23614
Chemical/Pharm GKB GenePA33691
Clinical trialPPY2P
Miscellaneous
canSAR (ICR)PPY2P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPY2P
EVEXPPY2P
GoPubMedPPY2P
iHOPPPY2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:36:34 CET 2017

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