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PQLC2L (PQ loop repeat containing 2-like)

Identity

Alias_namesC3orf55
chromosome 3 open reading frame 55
Other alias
HGNC (Hugo) PQLC2L
LocusID (NCBI) 152078
Atlas_Id 54173
Location 3q25.32  [Link to chromosome band 3q25]
Location_base_pair Starts at 157261133 and ends at 157296680 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GMPS (3q25.31) / PQLC2L (3q25.32)PQLC2L (3q25.32) / CHRD (3q27.1)PQLC2L (3q25.32) / VEPH1 (3q25.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)PQLC2L   25146
Cards
Entrez_Gene (NCBI)PQLC2L  152078  PQ loop repeat containing 2-like
AliasesC3orf55
GeneCards (Weizmann)PQLC2L
Ensembl hg19 (Hinxton)ENSG00000174899 [Gene_View]  chr3:157261133-157296680 [Contig_View]  PQLC2L [Vega]
Ensembl hg38 (Hinxton)ENSG00000174899 [Gene_View]  chr3:157261133-157296680 [Contig_View]  PQLC2L [Vega]
ICGC DataPortalENSG00000174899
TCGA cBioPortalPQLC2L
AceView (NCBI)PQLC2L
Genatlas (Paris)PQLC2L
WikiGenes152078
SOURCE (Princeton)PQLC2L
Genetics Home Reference (NIH)PQLC2L
Genomic and cartography
GoldenPath hg19 (UCSC)PQLC2L  -     chr3:157261133-157296680 +  3q25.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PQLC2L  -     3q25.32   [Description]    (hg38-Dec_2013)
EnsemblPQLC2L - 3q25.32 [CytoView hg19]  PQLC2L - 3q25.32 [CytoView hg38]
Mapping of homologs : NCBIPQLC2L [Mapview hg19]  PQLC2L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA131625 AI377021 AW151487 BC010062 BC029129
RefSeq transcript (Entrez)NM_001099777 NM_001130001 NM_001130002 NM_001243729
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)PQLC2L
Cluster EST : UnigeneHs.259046 [ NCBI ]
CGAP (NCI)Hs.259046
Alternative Splicing GalleryENSG00000174899
Gene ExpressionPQLC2L [ NCBI-GEO ]   PQLC2L [ EBI - ARRAY_EXPRESS ]   PQLC2L [ SEEK ]   PQLC2L [ MEM ]
Gene Expression Viewer (FireBrowse)PQLC2L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)152078
GTEX Portal (Tissue expression)PQLC2L
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PQLC2L
DMDM Disease mutations152078
Blocks (Seattle)PQLC2L
Human Protein AtlasENSG00000174899
IPIIPI00908820   IPI00455588   IPI00983671   IPI00788855   IPI00947470   IPI00947498   
Protein Interaction databases
FunCoupENSG00000174899
BioGRIDPQLC2L
STRING (EMBL)PQLC2L
ZODIACPQLC2L
Ontologies - Pathways
Huge Navigator PQLC2L [HugePedia]
snp3D : Map Gene to Disease152078
BioCentury BCIQPQLC2L
ClinGenPQLC2L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD152078
Chemical/Pharm GKB GenePA143485331
Clinical trialPQLC2L
Miscellaneous
canSAR (ICR)PQLC2L (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePQLC2L
EVEXPQLC2L
GoPubMedPQLC2L
iHOPPQLC2L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:15:27 CEST 2017

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