Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PRAC2 (prostate cancer susceptibility candidate 2)

Identity

Alias_namesrectum and colon 2
C17orf93
NCRNA00253
HOXB13-AS1
HOXB-AS5
Other alias
HGNC (Hugo) PRAC2
LocusID (NCBI) 360205
Atlas_Id 53513
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 46800530 and ends at 46802120 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRAC2   30143
Cards
Entrez_Gene (NCBI)PRAC2  360205  prostate cancer susceptibility candidate 2
AliasesC17orf93; HOXB-AS5; HOXB13-AS1; NCRNA00253
GeneCards (Weizmann)PRAC2
Ensembl hg19 (Hinxton)ENSG00000229637 [Gene_View]  chr17:46800530-46802120 [Contig_View]  PRAC2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000229637 [Gene_View]  chr17:46800530-46802120 [Contig_View]  PRAC2 [Vega]
ICGC DataPortalENSG00000229637
TCGA cBioPortalPRAC2
AceView (NCBI)PRAC2
Genatlas (Paris)PRAC2
WikiGenes360205
SOURCE (Princeton)PRAC2
Genetics Home Reference (NIH)PRAC2
Genomic and cartography
GoldenPath hg19 (UCSC)PRAC2  -     chr17:46800530-46802120 +  17q21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PRAC2  -     17q21.32   [Description]    (hg38-Dec_2013)
EnsemblPRAC2 - 17q21.32 [CytoView hg19]  PRAC2 - 17q21.32 [CytoView hg38]
Mapping of homologs : NCBIPRAC2 [Mapview hg19]  PRAC2 [Mapview hg38]
OMIM610787   
Gene and transcription
Genbank (Entrez)AF532777 AI201489 AI762586 BX106051
RefSeq transcript (Entrez)NM_001282275 NM_001282276
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_033789 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)PRAC2
Cluster EST : UnigeneHs.236557 [ NCBI ]
CGAP (NCI)Hs.236557
Alternative Splicing GalleryENSG00000229637
Gene ExpressionPRAC2 [ NCBI-GEO ]   PRAC2 [ EBI - ARRAY_EXPRESS ]   PRAC2 [ SEEK ]   PRAC2 [ MEM ]
Gene Expression Viewer (FireBrowse)PRAC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)360205
GTEX Portal (Tissue expression)PRAC2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRAC2
DMDM Disease mutations360205
Blocks (Seattle)PRAC2
Human Protein AtlasENSG00000229637
IPIIPI00791469   
Protein Interaction databases
FunCoupENSG00000229637
BioGRIDPRAC2
STRING (EMBL)PRAC2
ZODIACPRAC2
Ontologies - Pathways
Huge Navigator PRAC2 [HugePedia]
snp3D : Map Gene to Disease360205
BioCentury BCIQPRAC2
ClinGenPRAC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD360205
Chemical/Pharm GKB GenePA165432260
Clinical trialPRAC2
Miscellaneous
canSAR (ICR)PRAC2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRAC2
EVEXPRAC2
GoPubMedPRAC2
iHOPPRAC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:22:42 CET 2017

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