Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PRAMEF33 (PRAME family member 33)

Identity

Other aliasPRAMEF33P
HGNC (Hugo) PRAMEF33
LocusID (NCBI) 645382
Atlas_Id 57007
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 13303539 and ends at 13308907 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRAMEF33   49193
Cards
Entrez_Gene (NCBI)PRAMEF33  645382  PRAME family member 33
AliasesPRAMEF33P
GeneCards (Weizmann)PRAMEF33
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:13303539-13308907 [Contig_View]  PRAMEF33 [Vega]
TCGA cBioPortalPRAMEF33
AceView (NCBI)PRAMEF33
Genatlas (Paris)PRAMEF33
WikiGenes645382
SOURCE (Princeton)PRAMEF33
Genetics Home Reference (NIH)PRAMEF33
Genomic and cartography
GoldenPath hg38 (UCSC)PRAMEF33  -     chr1:13303539-13308907 +  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRAMEF33  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblPRAMEF33 - 1p36.21 [CytoView hg19]  PRAMEF33 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIPRAMEF33 [Mapview hg19]  PRAMEF33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001291381
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_022771 NG_022772 NT_187517 NW_012132914 NW_015495298
Consensus coding sequences : CCDS (NCBI)PRAMEF33
Gene ExpressionPRAMEF33 [ NCBI-GEO ]   PRAMEF33 [ EBI - ARRAY_EXPRESS ]   PRAMEF33 [ SEEK ]   PRAMEF33 [ MEM ]
Gene Expression Viewer (FireBrowse)PRAMEF33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645382
GTEX Portal (Tissue expression)PRAMEF33
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRAMEF33
DMDM Disease mutations645382
Blocks (Seattle)PRAMEF33
Protein Interaction databases
BioGRIDPRAMEF33
STRING (EMBL)PRAMEF33
ZODIACPRAMEF33
Ontologies - Pathways
Huge Navigator PRAMEF33 [HugePedia]
snp3D : Map Gene to Disease645382
BioCentury BCIQPRAMEF33
ClinGenPRAMEF33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645382
Clinical trialPRAMEF33
Miscellaneous
canSAR (ICR)PRAMEF33 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRAMEF33
EVEXPRAMEF33
GoPubMedPRAMEF33
iHOPPRAMEF33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:30:09 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.