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PRAMEF34P (PRAME family member 34, pseudogene)

Identity

Other alias-
HGNC (Hugo) PRAMEF34P
LocusID (NCBI) 649324
Atlas_Id 77959
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 13094515 and ends at 13099717 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRAMEF34P   51895
Cards
Entrez_Gene (NCBI)PRAMEF34P  649324  PRAME family member 34, pseudogene
Aliases
GeneCards (Weizmann)PRAMEF34P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:13094515-13099717 [Contig_View]  PRAMEF34P [Vega]
TCGA cBioPortalPRAMEF34P
AceView (NCBI)PRAMEF34P
Genatlas (Paris)PRAMEF34P
WikiGenes649324
SOURCE (Princeton)PRAMEF34P
Genetics Home Reference (NIH)PRAMEF34P
Genomic and cartography
GoldenPath hg38 (UCSC)PRAMEF34P  -     chr1:13094515-13099717 -  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRAMEF34P  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblPRAMEF34P - 1p36.21 [CytoView hg19]  PRAMEF34P - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIPRAMEF34P [Mapview hg19]  PRAMEF34P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI825623
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_028825 NT_187517 NW_012132914 NW_015495298
Consensus coding sequences : CCDS (NCBI)PRAMEF34P
Cluster EST : UnigeneHs.538217 [ NCBI ]
CGAP (NCI)Hs.538217
Gene ExpressionPRAMEF34P [ NCBI-GEO ]   PRAMEF34P [ EBI - ARRAY_EXPRESS ]   PRAMEF34P [ SEEK ]   PRAMEF34P [ MEM ]
Gene Expression Viewer (FireBrowse)PRAMEF34P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)649324
GTEX Portal (Tissue expression)PRAMEF34P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRAMEF34P
DMDM Disease mutations649324
Blocks (Seattle)PRAMEF34P
Protein Interaction databases
BioGRIDPRAMEF34P
STRING (EMBL)PRAMEF34P
ZODIACPRAMEF34P
Ontologies - Pathways
Huge Navigator PRAMEF34P [HugePedia]
snp3D : Map Gene to Disease649324
BioCentury BCIQPRAMEF34P
ClinGenPRAMEF34P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD649324
Clinical trialPRAMEF34P
Miscellaneous
canSAR (ICR)PRAMEF34P (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRAMEF34P
EVEXPRAMEF34P
GoPubMedPRAMEF34P
iHOPPRAMEF34P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:28 CET 2017

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