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PRCAT47 (prostate cancer-associated 47)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100996425
Atlas_Id 55346
Location 16q23.2  [Link to chromosome band 16q23]
Location_base_pair Starts at 80862632 and ends at 80926493 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PRCAT47  100996425  prostate cancer-associated 47
Aliases
GeneCards (Weizmann)PRCAT47
Ensembl hg19 (Hinxton)ENSG00000260896 [Gene_View]  chr16:80862632-80926493 [Contig_View]  PRCAT47 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260896 [Gene_View]  chr16:80862632-80926493 [Contig_View]  PRCAT47 [Vega]
ICGC DataPortalENSG00000260896
TCGA cBioPortalPRCAT47
AceView (NCBI)PRCAT47
Genatlas (Paris)PRCAT47
WikiGenes100996425
SOURCE (Princeton)PRCAT47
Genetics Home Reference (NIH)PRCAT47
Genomic and cartography
GoldenPath hg19 (UCSC)PRCAT47  -     chr16:80862632-80926493 -  16q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PRCAT47  -     16q23.2   [Description]    (hg38-Dec_2013)
EnsemblPRCAT47 - 16q23.2 [CytoView hg19]  PRCAT47 - 16q23.2 [CytoView hg38]
Mapping of homologs : NCBIPRCAT47 [Mapview hg19]  PRCAT47 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA876610 AK093002 BG166652 BG171753 CR739737
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)PRCAT47
Cluster EST : UnigeneHs.125350 [ NCBI ]
CGAP (NCI)Hs.125350
Alternative Splicing GalleryENSG00000260896
Gene ExpressionPRCAT47 [ NCBI-GEO ]   PRCAT47 [ EBI - ARRAY_EXPRESS ]   PRCAT47 [ SEEK ]   PRCAT47 [ MEM ]
Gene Expression Viewer (FireBrowse)PRCAT47 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996425
GTEX Portal (Tissue expression)PRCAT47
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRCAT47
DMDM Disease mutations100996425
Blocks (Seattle)PRCAT47
Human Protein AtlasENSG00000260896
Protein Interaction databases
FunCoupENSG00000260896
BioGRIDPRCAT47
STRING (EMBL)PRCAT47
ZODIACPRCAT47
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100996425
BioCentury BCIQPRCAT47
ClinGenPRCAT47
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996425
Clinical trialPRCAT47
Miscellaneous
canSAR (ICR)PRCAT47 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRCAT47
EVEXPRCAT47
GoPubMedPRCAT47
iHOPPRCAT47
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:15:32 CEST 2017

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