Atlas of Genetics and Cytogenetics in Oncology and Haematology

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PRDM15 (PR/SET domain 15)


Alias (NCBI)C21orf83
HGNC (Hugo) PRDM15
HGNC Previous nameZNF298
HGNC Previous namechromosome 21 open reading frame 83
 PR domain containing 15
 PR domain 15
LocusID (NCBI) 63977
Atlas_Id 72195
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 41798225 and ends at 41879344 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(19;21)(p13;q22) MAP2K7/PRDM15
t(19;21)(p13;q22) MAP2K7/PRDM15

External links

HGNC (Hugo)PRDM15   13999
Entrez_Gene (NCBI)PRDM15    PR/SET domain 15
AliasesC21orf83; PFM15; ZNF298
GeneCards (Weizmann)PRDM15
Ensembl hg19 (Hinxton)ENSG00000141956 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141956 [Gene_View]  ENSG00000141956 [Sequence]  chr21:41798225-41879344 [Contig_View]  PRDM15 [Vega]
ICGC DataPortalENSG00000141956
TCGA cBioPortalPRDM15
AceView (NCBI)PRDM15
Genatlas (Paris)PRDM15
SOURCE (Princeton)PRDM15
Genetics Home Reference (NIH)PRDM15
Genomic and cartography
GoldenPath hg38 (UCSC)PRDM15  -     chr21:41798225-41879344 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRDM15  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathPRDM15 - 21q22.3 [CytoView hg19]  PRDM15 - 21q22.3 [CytoView hg38]
Genome Data Viewer NCBIPRDM15 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB051812 AB051813 AB051814 AB051814 AB051815
RefSeq transcript (Entrez)NM_001040424 NM_001282934 NM_022115
Consensus coding sequences : CCDS (NCBI)PRDM15
Gene ExpressionPRDM15 [ NCBI-GEO ]   PRDM15 [ EBI - ARRAY_EXPRESS ]   PRDM15 [ SEEK ]   PRDM15 [ MEM ]
Gene Expression Viewer (FireBrowse)PRDM15 [ Firebrowse - Broad ]
GenevisibleExpression of PRDM15 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63977
GTEX Portal (Tissue expression)PRDM15
Human Protein AtlasENSG00000141956-PRDM15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRDM15
Human Protein Atlas [tissue]ENSG00000141956-PRDM15 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:17:05 CEST 2021

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