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PREX1 (phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1)

Identity

Alias (NCBI)P-REX1
HGNC (Hugo) PREX1
HGNC Alias symbKIAA1415
P-REX1
HGNC Alias namePIP3 dependent Rac exchange factor 1
HGNC Previous namephosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
LocusID (NCBI) 57580
Atlas_Id 43426
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 48624253 and ends at 48827999 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ATP11C (Xq27.1) / PREX1 (20q13.13)PREX1 (20q13.13) / ARFGEF2 (20q13.13)PREX1 (20q13.13) / EHBP1 (2p15)
PREX1 (20q13.13) / MFN1 (3q26.33)PREX1 (20q13.13) / SUGT1 (13q14.3)RP11-123B3.6 () / PREX1 (20q13.13)
STAU1 (20q13.13) / PREX1 (20q13.13)ATP11C Xq27.1 / PREX1 20q13.13PREX1 20q13.13 / EHBP1 2p15
PREX1 20q13.13 / MFN1 3q26.33RP11-123B3.6 PREX1 20q13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PREX1   32594
Cards
Entrez_Gene (NCBI)PREX1    phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1
AliasesP-REX1
GeneCards (Weizmann)PREX1
Ensembl hg19 (Hinxton)ENSG00000124126 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124126 [Gene_View]  ENSG00000124126 [Sequence]  chr20:48624253-48827999 [Contig_View]  PREX1 [Vega]
ICGC DataPortalENSG00000124126
TCGA cBioPortalPREX1
AceView (NCBI)PREX1
Genatlas (Paris)PREX1
SOURCE (Princeton)PREX1
Genetics Home Reference (NIH)PREX1
Genomic and cartography
GoldenPath hg38 (UCSC)PREX1  -     chr20:48624253-48827999 -  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PREX1  -     20q13.13   [Description]    (hg19-Feb_2009)
GoldenPathPREX1 - 20q13.13 [CytoView hg19]  PREX1 - 20q13.13 [CytoView hg38]
ImmunoBaseENSG00000124126
genome Data Viewer NCBIPREX1 [Mapview hg19]  
OMIM606905   
Gene and transcription
Genbank (Entrez)AB037836 AJ320261 AK090860 AL136579 AL832913
RefSeq transcript (Entrez)NM_020820
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PREX1
Alternative Splicing GalleryENSG00000124126
Gene ExpressionPREX1 [ NCBI-GEO ]   PREX1 [ EBI - ARRAY_EXPRESS ]   PREX1 [ SEEK ]   PREX1 [ MEM ]
Gene Expression Viewer (FireBrowse)PREX1 [ Firebrowse - Broad ]
GenevisibleExpression of PREX1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57580
GTEX Portal (Tissue expression)PREX1
Human Protein AtlasENSG00000124126-PREX1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PREX1
Blocks (Seattle)PREX1
Human Protein Atlas [tissue]ENSG00000124126-PREX1 [tissue]
HPRD06066
IPIIPI00295252   IPI00218429   IPI00552692   
Protein Interaction databases
BioGRIDPREX1
STRING (EMBL)PREX1
ZODIACPREX1
Ontologies - Pathways
Litterature
PubMed74 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPREX1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:40:57 CET 2021
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