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PRG1 (p53-responsive gene 1)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 23574
Atlas_Id 41840
Location 19q13.31  [Link to chromosome band 19q13]
Location_base_pair Starts at 43349056 and ends at 43349548 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PRG1  23574  p53-responsive gene 1
Aliases
GeneCards (Weizmann)PRG1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:43349056-43349548 [Contig_View]  PRG1 [Vega]
TCGA cBioPortalPRG1
AceView (NCBI)PRG1
Genatlas (Paris)PRG1
WikiGenes23574
SOURCE (Princeton)PRG1
Genetics Home Reference (NIH)PRG1
Genomic and cartography
GoldenPath hg38 (UCSC)PRG1  -     chr19:43349056-43349548 +  19q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRG1  -     19q13.31   [Description]    (hg19-Feb_2009)
EnsemblPRG1 - 19q13.31 [CytoView hg19]  PRG1 - 19q13.31 [CytoView hg38]
Mapping of homologs : NCBIPRG1 [Mapview hg19]  PRG1 [Mapview hg38]
OMIM605157   
Gene and transcription
Genbank (Entrez)AF147072
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRG1
Cluster EST : UnigeneHs.721578 [ NCBI ]
CGAP (NCI)Hs.721578
Gene ExpressionPRG1 [ NCBI-GEO ]   PRG1 [ EBI - ARRAY_EXPRESS ]   PRG1 [ SEEK ]   PRG1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)23574
GTEX Portal (Tissue expression)PRG1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRG1
DMDM Disease mutations23574
Blocks (Seattle)PRG1
Protein Interaction databases
BioGRIDPRG1
STRING (EMBL)PRG1
ZODIACPRG1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease23574
BioCentury BCIQPRG1
ClinGenPRG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23574
Clinical trialPRG1
Miscellaneous
canSAR (ICR)PRG1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRG1
EVEXPRG1
GoPubMedPRG1
iHOPPRG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:30:15 CET 2017

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