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PRH1 (proline rich protein HaeIII subfamily 1)

Identity

Alias (NCBI)Db-s
PA
PIF-S
PRH2
PRP-1/PRP-2
Pr1/Pr2
HGNC (Hugo) PRH1
HGNC Alias symbPa
LocusID (NCBI) 5554
Atlas_Id 72200
Location 12p13.2  [Link to chromosome band 12p13]
Location_base_pair Starts at 10880965 and ends at 11171611 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DIP2A (21q22.3) / PRH1 (12p13.2)TSPAN9 (12p13.33) / PRH1 (12p13.2)TSPAN9 PRH1
DIP2A PRH1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PRH1   9366
Cards
Entrez_Gene (NCBI)PRH1    proline rich protein HaeIII subfamily 1
AliasesDb-s; PA; PIF-S; PRH2; 
PRP-1/PRP-2; Pr1/Pr2
GeneCards (Weizmann)PRH1
Ensembl hg19 (Hinxton)ENSG00000231887 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231887 [Gene_View]  ENSG00000231887 [Sequence]  chr12:10880965-11171611 [Contig_View]  PRH1 [Vega]
ICGC DataPortalENSG00000231887
TCGA cBioPortalPRH1
AceView (NCBI)PRH1
Genatlas (Paris)PRH1
SOURCE (Princeton)PRH1
Genetics Home Reference (NIH)PRH1
Genomic and cartography
GoldenPath hg38 (UCSC)PRH1  -     chr12:10880965-11171611 -  12p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRH1  -     12p13.2   [Description]    (hg19-Feb_2009)
GoldenPathPRH1 - 12p13.2 [CytoView hg19]  PRH1 - 12p13.2 [CytoView hg38]
ImmunoBaseENSG00000231887
Genome Data Viewer NCBIPRH1 [Mapview hg19]  
OMIM168730   
Gene and transcription
Genbank (Entrez)AB593028 AB593029 BC031043 BC064553 BC128192
RefSeq transcript (Entrez)NM_001291314 NM_001291315 NM_001393989 NM_006250
Consensus coding sequences : CCDS (NCBI)PRH1
Gene ExpressionPRH1 [ NCBI-GEO ]   PRH1 [ EBI - ARRAY_EXPRESS ]   PRH1 [ SEEK ]   PRH1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRH1 [ Firebrowse - Broad ]
GenevisibleExpression of PRH1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5554
GTEX Portal (Tissue expression)PRH1
Human Protein AtlasENSG00000231887-PRH1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP02810   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP02810  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP02810
PhosPhoSitePlusP02810
Domains : Interpro (EBI)Pro-rich   
Domain families : Pfam (Sanger)Pro-rich (PF15240)   
Domain families : Pfam (NCBI)pfam15240   
Domain families : Smart (EMBL)Pro-rich (SM01412)  
Conserved Domain (NCBI)PRH1
SuperfamilyP02810
AlphaFold pdb e-kbP02810   
Human Protein Atlas [tissue]ENSG00000231887-PRH1 [tissue]
HPRD01349
Protein Interaction databases
DIP (DOE-UCLA)P02810
IntAct (EBI)P02810
BioGRIDPRH1
STRING (EMBL)PRH1
ZODIACPRH1
Ontologies - Pathways
QuickGOP02810
Ontology : AmiGOprotein binding  extracellular space  
Ontology : EGO-EBIprotein binding  extracellular space  
NDEx NetworkPRH1
Atlas of Cancer Signalling NetworkPRH1
Wikipedia pathwaysPRH1
Orthology - Evolution
OrthoDB5554
GeneTree (enSembl)ENSG00000231887
Phylogenetic Trees/Animal Genes : TreeFamPRH1
Homologs : HomoloGenePRH1
Homology/Alignments : Family Browser (UCSC)PRH1
Gene fusions - Rearrangements
Fusion : QuiverPRH1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRH1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRH1
dbVarPRH1
ClinVarPRH1
MonarchPRH1
1000_GenomesPRH1 
Exome Variant ServerPRH1
GNOMAD BrowserENSG00000231887
Varsome BrowserPRH1
ACMGPRH1 variants
VarityP02810
Genomic Variants (DGV)PRH1 [DGVbeta]
DECIPHERPRH1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRH1 
Mutations
ICGC Data PortalPRH1 
TCGA Data PortalPRH1 
Broad Tumor PortalPRH1
OASIS PortalPRH1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRH1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPRH1
Mutations and Diseases : HGMDPRH1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPRH1
DgiDB (Drug Gene Interaction Database)PRH1
DoCM (Curated mutations)PRH1
CIViC (Clinical Interpretations of Variants in Cancer)PRH1
Cancer3DPRH1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM168730   
Orphanet
DisGeNETPRH1
MedgenPRH1
Genetic Testing Registry PRH1
NextProtP02810 [Medical]
GENETestsPRH1
Target ValidationPRH1
Huge Navigator PRH1 [HugePedia]
ClinGenPRH1
Clinical trials, drugs, therapy
MyCancerGenomePRH1
Protein Interactions : CTDPRH1
Pharm GKB GenePA33737
PharosP02810
Clinical trialPRH1
Miscellaneous
canSAR (ICR)PRH1
HarmonizomePRH1
DataMed IndexPRH1
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRH1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:17:07 CEST 2021

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