Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PRKAG2-AS1 (PRKAG2 antisense RNA 1)

Identity

Alias_namesPRKAG2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) PRKAG2-AS1
LocusID (NCBI) 100505483
Atlas_Id 72210
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 151877042 and ends at 151879223 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PRKAG2-AS1   40468
Cards
Entrez_Gene (NCBI)PRKAG2-AS1  100505483  PRKAG2 antisense RNA 1
Aliases
GeneCards (Weizmann)PRKAG2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr7:151877042-151879223 [Contig_View]  PRKAG2-AS1 [Vega]
TCGA cBioPortalPRKAG2-AS1
AceView (NCBI)PRKAG2-AS1
Genatlas (Paris)PRKAG2-AS1
WikiGenes100505483
SOURCE (Princeton)PRKAG2-AS1
Genetics Home Reference (NIH)PRKAG2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PRKAG2-AS1  -     chr7:151877042-151879223 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRKAG2-AS1  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblPRKAG2-AS1 - 7q36.1 [CytoView hg19]  PRKAG2-AS1 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIPRKAG2-AS1 [Mapview hg19]  PRKAG2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031308 BC131560 CA419137 KR153483
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRKAG2-AS1
Cluster EST : UnigeneHs.649054 [ NCBI ]
CGAP (NCI)Hs.649054
Gene ExpressionPRKAG2-AS1 [ NCBI-GEO ]   PRKAG2-AS1 [ EBI - ARRAY_EXPRESS ]   PRKAG2-AS1 [ SEEK ]   PRKAG2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRKAG2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505483
GTEX Portal (Tissue expression)PRKAG2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRKAG2-AS1
DMDM Disease mutations100505483
Blocks (Seattle)PRKAG2-AS1
Protein Interaction databases
BioGRIDPRKAG2-AS1
STRING (EMBL)PRKAG2-AS1
ZODIACPRKAG2-AS1
Ontologies - Pathways
Huge Navigator PRKAG2-AS1 [HugePedia]
snp3D : Map Gene to Disease100505483
BioCentury BCIQPRKAG2-AS1
ClinGenPRKAG2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505483
Clinical trialPRKAG2-AS1
Miscellaneous
canSAR (ICR)PRKAG2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRKAG2-AS1
EVEXPRKAG2-AS1
GoPubMedPRKAG2-AS1
iHOPPRKAG2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:25:02 CEST 2018
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.