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PRKCB (protein kinase C beta)

Identity

Alias (NCBI)PKC-beta
PKCB
PKCI(2)
PKCbeta
PRKCB1
PRKCB2
HGNC (Hugo) PRKCB
HGNC Alias symbPKCĪ²
HGNC Previous namePRKCB2
 PKCB
 PRKCB1
HGNC Previous nameprotein kinase C, beta 1
 protein kinase C, beta
LocusID (NCBI) 5579
Atlas_Id 50316
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 23835983 and ends at 24220611 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABCC1 (16p13.11) / PRKCB (16p12.2)ADCY9 (16p13.3) / PRKCB (16p12.2)DDX5 (17q23.3) / PRKCB (16p12.2)
FAM96A (15q22.31) / PRKCB (16p12.2)GGA2 (16p12.2) / PRKCB (16p12.2)GPAM (10q25.2) / PRKCB (16p12.2)
PDPN (1p36.21) / PRKCB (16p12.2)PRKCB (16p12.2) / BCL11A (2p16.1)PRKCB (16p12.2) / CHRNA4 (20q13.33)
PRKCB (16p12.2) / LEMD2 (6p21.31)PRPS1 (Xq22.3) / PRKCB (16p12.2)PTRH2 (17q23.1) / PRKCB (16p12.2)
SPNS1 (16p11.2) / PRKCB (16p12.2)TNRC6A (16p12.1) / PRKCB (16p12.2)ABCC1 16p13.11 / PRKCB 16p12.2
ADCY9 16p13.3 / PRKCB 16p12.2GGA2 16p12.2 / PRKCB 16p12.2SPNS1 16p11.2 / PRKCB 16p12.2
TNRC6A 16p12.1 / PRKCB 16p12.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PRKCB   9395
Cards
Entrez_Gene (NCBI)PRKCB    protein kinase C beta
AliasesPKC-beta; PKCB; PKCI(2); PKCbeta; 
PRKCB1; PRKCB2
GeneCards (Weizmann)PRKCB
Ensembl hg19 (Hinxton)ENSG00000166501 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166501 [Gene_View]  ENSG00000166501 [Sequence]  chr16:23835983-24220611 [Contig_View]  PRKCB [Vega]
ICGC DataPortalENSG00000166501
TCGA cBioPortalPRKCB
AceView (NCBI)PRKCB
Genatlas (Paris)PRKCB
SOURCE (Princeton)PRKCB
Genetics Home Reference (NIH)PRKCB
Genomic and cartography
GoldenPath hg38 (UCSC)PRKCB  -     chr16:23835983-24220611 +  16p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRKCB  -     16p12.2   [Description]    (hg19-Feb_2009)
GoldenPathPRKCB - 16p12.2 [CytoView hg19]  PRKCB - 16p12.2 [CytoView hg38]
ImmunoBaseENSG00000166501
Genome Data Viewer NCBIPRKCB [Mapview hg19]  
OMIM176970   
Gene and transcription
Genbank (Entrez)AA613106 AI423262 AJ002788 AK057555 AK123381
RefSeq transcript (Entrez)NM_002738 NM_212535
Consensus coding sequences : CCDS (NCBI)PRKCB
Gene ExpressionPRKCB [ NCBI-GEO ]   PRKCB [ EBI - ARRAY_EXPRESS ]   PRKCB [ SEEK ]   PRKCB [ MEM ]
Gene Expression Viewer (FireBrowse)PRKCB [ Firebrowse - Broad ]
GenevisibleExpression of PRKCB in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5579
GTEX Portal (Tissue expression)PRKCB
Human Protein AtlasENSG00000166501-PRKCB [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRKCB
Human Protein Atlas [tissue]ENSG00000166501-PRKCB [tissue]
HPRD01499
Protein Interaction databases
BioGRIDPRKCB
STRING (EMBL)PRKCB
ZODIACPRKCB
Ontologies - Pathways
Litterature
PubMed409 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRKCB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:26:51 CEST 2021

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