Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PRKXP1 (protein kinase, X-linked, pseudogene 1)

Identity

Other alias-
HGNC (Hugo) PRKXP1
LocusID (NCBI) 441733
Atlas_Id 72217
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 101087957 and ends at 101099488 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRKXP1   9442
Cards
Entrez_Gene (NCBI)PRKXP1  441733  protein kinase, X-linked, pseudogene 1
Aliases
GeneCards (Weizmann)PRKXP1
Ensembl hg19 (Hinxton) [Gene_View]  chr15:101087957-101099488 [Contig_View]  PRKXP1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:101087957-101099488 [Contig_View]  PRKXP1 [Vega]
TCGA cBioPortalPRKXP1
AceView (NCBI)PRKXP1
Genatlas (Paris)PRKXP1
WikiGenes441733
SOURCE (Princeton)PRKXP1
Genetics Home Reference (NIH)PRKXP1
Genomic and cartography
GoldenPath hg19 (UCSC)PRKXP1  -     chr15:101087957-101099488 -  15q26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PRKXP1  -     15q26.3   [Description]    (hg38-Dec_2013)
EnsemblPRKXP1 - 15q26.3 [CytoView hg19]  PRKXP1 - 15q26.3 [CytoView hg38]
Mapping of homologs : NCBIPRKXP1 [Mapview hg19]  PRKXP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095793 Y10481 Y10483
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_005679 NT_010194 NW_004929399
Consensus coding sequences : CCDS (NCBI)PRKXP1
Cluster EST : UnigeneHs.12250 [ NCBI ]
CGAP (NCI)Hs.12250
Gene ExpressionPRKXP1 [ NCBI-GEO ]   PRKXP1 [ EBI - ARRAY_EXPRESS ]   PRKXP1 [ SEEK ]   PRKXP1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRKXP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441733
GTEX Portal (Tissue expression)PRKXP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRKXP1
DMDM Disease mutations441733
Blocks (Seattle)PRKXP1
Protein Interaction databases
BioGRIDPRKXP1
STRING (EMBL)PRKXP1
ZODIACPRKXP1
Ontologies - Pathways
Huge Navigator PRKXP1 [HugePedia]
snp3D : Map Gene to Disease441733
BioCentury BCIQPRKXP1
ClinGenPRKXP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441733
Chemical/Pharm GKB GenePA33787
Clinical trialPRKXP1
Miscellaneous
canSAR (ICR)PRKXP1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRKXP1
EVEXPRKXP1
GoPubMedPRKXP1
iHOPPRKXP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:39:39 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.