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PRND (prion protein 2 (dublet))

Identity

Other namesDOPPEL
DPL
PrPLP
dJ1068H6.4
HGNC (Hugo) PRND
LocusID (NCBI) 23627
Location 20p13
Location_base_pair Starts at 4702556 and ends at 4709106 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)PRND   15748
Entrez_Gene (NCBI)PRND  23627  prion protein 2 (dublet)
Cards
GeneCards (Weizmann)PRND
Ensembl (Hinxton)ENSG00000171864 [Gene_View]  chr20:4702556-4709106 [Contig_View]  PRND [Vega]
AceView (NCBI)PRND
Genatlas (Paris)PRND
SOURCE (Stanford)NM_012409
Genomic and cartography
GoldenPath (UCSC)PRND  -  20p13   chr20:4702556-4709106 +  20p13   [Description]    (hg19-Feb_2009)
EnsemblPRND - 20p13 [CytoView]
Mapping of homologs : NCBIPRND [Mapview]
OMIM604263   
Gene and transcription
Genbank (Entrez)AF086354 AF187843 AF187844 AK313404 AY358985
RefSeq transcript (SRS)NM_012409
RefSeq transcript (Entrez)NM_012409
RefSeq genomic (SRS)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838652 NW_004078100
RefSeq genomic (Entrez)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838652 NW_004078100
Consensus coding sequences : CCDS (NCBI)PRND
Cluster EST : UnigeneHs.406696 [ SRS ] Hs.406696 [ NCBI ]
CGAP (NCI)Hs.406696
Alternative Splicing : Fast-db (Paris)GSHG0018542
Alternative Splicing GalleryENSG00000171864
Gene ExpressionPRND [ NCBI-GEO ]   PRND [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UKY0 (SRS) Q9UKY0 (Uniprot)
NextProtQ9UKY0
With graphics : InterProQ9UKY0
Splice isoforms : SwissVarQ9UKY0(Swissvar)
Domains : Interpro (SRS)Doppel    Prion/Doppel_prot_b-ribbon_dom   
Domains : Interpro (EBI)Doppel    Prion/Doppel_prot_b-ribbon_dom   
Related proteins : CluSTrQ9UKY0
Domain families : Pfam (SRS)Doppel (PF11466)    Prion (PF00377)   
Domain families : Pfam (Sanger)Doppel (PF11466)    Prion (PF00377)   
Domain families : Pfam (NCBI)pfam11466    pfam00377   
DMDM23627
Blocks (Seattle)Q9UKY0
PDB (SRS)1LG4   
PDB (PDBSum)1LG4   
PDB (IMB)1LG4   
PDB (RSDB)1LG4   
Human Protein AtlasENSG00000171864
HPRD05039
IPIIPI00018275   
Protein Interaction databases
DIP (DOE-UCLA)Q9UKY0
IntAct (EBI)Q9UKY0
FunCoupENSG00000171864
REACTOMEPRND
Protein Interaction Database23627
BioGRIDPRND
InParanoidQ9UKY0
Interologous Interaction database Q9UKY0
IntegromeDBPRND
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)PRND
SNP (GeneSNP Utah)PRND
SNP : HGBasePRND
Genetic variants : HAPMAPPRND
Somatic Mutations in Cancer : COSMICPRND 
CONAN: Copy Number AnalysisPRND 
Mutations and Diseases : HGMDPRND
OMIM604263   
GENETests604263   
Disease Genetic AssociationPRND
Huge Navigator PRND [HugePedia]  PRND [HugeCancerGEM]
Genomic VariantsPRND  PRND [DGVbeta]
ClinVarPRND
snp3D : Map Gene to Disease23627
General knowledge
Homologs : HomoloGenePRND
Homology/Alignments : Family Browser (UCSC)PRND
Phylogenetic Trees/Animal Genes : TreeFamPRND
Chemical/Protein Interactions : CTD23627
Chemical/Pharm GKB GenePA33795
Clinical trialPRND
Cancer Resource (Charite)ENSG00000171864
Ontology : AmiGOcopper ion binding  plasma membrane  cellular copper ion homeostasis  anchored to membrane  protein homooligomerization  
Ontology : EGO-EBIcopper ion binding  plasma membrane  cellular copper ion homeostasis  anchored to membrane  protein homooligomerization  
Other databases
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
PubGenePRND
iHOPPRND
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:46:05 CEST 2013
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