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PROCR (protein C receptor)

Identity

Alias_namesprotein C receptor
Alias_symbol (synonym)EPCR
CCD41
CD201
Other aliasCCCA
HGNC (Hugo) PROCR
LocusID (NCBI) 10544
Atlas_Id 43779
Location 20q11.22  [Link to chromosome band 20q11]
Location_base_pair Starts at 35171937 and ends at 35177362 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PROCR   9452
LRG (Locus Reference Genomic)LRG_638
Cards
Entrez_Gene (NCBI)PROCR  10544  protein C receptor
AliasesCCCA; CCD41; EPCR
GeneCards (Weizmann)PROCR
Ensembl hg19 (Hinxton)ENSG00000101000 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101000 [Gene_View]  chr20:35171937-35177362 [Contig_View]  PROCR [Vega]
ICGC DataPortalENSG00000101000
TCGA cBioPortalPROCR
AceView (NCBI)PROCR
Genatlas (Paris)PROCR
WikiGenes10544
SOURCE (Princeton)PROCR
Genetics Home Reference (NIH)PROCR
Genomic and cartography
GoldenPath hg38 (UCSC)PROCR  -     chr20:35171937-35177362 +  20q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PROCR  -     20q11.22   [Description]    (hg19-Feb_2009)
EnsemblPROCR - 20q11.22 [CytoView hg19]  PROCR - 20q11.22 [CytoView hg38]
Mapping of homologs : NCBIPROCR [Mapview hg19]  PROCR [Mapview hg38]
OMIM600646   
Gene and transcription
Genbank (Entrez)AK314887 BC014451 BG423815 BM808358 BQ939781
RefSeq transcript (Entrez)NM_006404
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PROCR
Cluster EST : UnigeneHs.647450 [ NCBI ]
CGAP (NCI)Hs.647450
Alternative Splicing GalleryENSG00000101000
Gene ExpressionPROCR [ NCBI-GEO ]   PROCR [ EBI - ARRAY_EXPRESS ]   PROCR [ SEEK ]   PROCR [ MEM ]
Gene Expression Viewer (FireBrowse)PROCR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10544
GTEX Portal (Tissue expression)PROCR
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UNN8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UNN8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UNN8
Splice isoforms : SwissVarQ9UNN8
PhosPhoSitePlusQ9UNN8
Domains : Interpro (EBI)Endothetial_C_recpt    MHC_I-like_Ag-recog    MHC_I/II-like_Ag-recog   
Domain families : Pfam (Sanger)MHC_I_3 (PF16497)   
Domain families : Pfam (NCBI)pfam16497   
Conserved Domain (NCBI)PROCR
DMDM Disease mutations10544
Blocks (Seattle)PROCR
PDB (SRS)1L8J    1LQV    3JTC    4V3D    4V3E   
PDB (PDBSum)1L8J    1LQV    3JTC    4V3D    4V3E   
PDB (IMB)1L8J    1LQV    3JTC    4V3D    4V3E   
PDB (RSDB)1L8J    1LQV    3JTC    4V3D    4V3E   
Structural Biology KnowledgeBase1L8J    1LQV    3JTC    4V3D    4V3E   
SCOP (Structural Classification of Proteins)1L8J    1LQV    3JTC    4V3D    4V3E   
CATH (Classification of proteins structures)1L8J    1LQV    3JTC    4V3D    4V3E   
SuperfamilyQ9UNN8
Human Protein AtlasENSG00000101000
Peptide AtlasQ9UNN8
HPRD02801
IPIIPI00009276   
Protein Interaction databases
DIP (DOE-UCLA)Q9UNN8
IntAct (EBI)Q9UNN8
FunCoupENSG00000101000
BioGRIDPROCR
STRING (EMBL)PROCR
ZODIACPROCR
Ontologies - Pathways
QuickGOQ9UNN8
Ontology : AmiGOreceptor activity  protein binding  extracellular region  centrosome  plasma membrane  integral component of plasma membrane  focal adhesion  blood coagulation  cell surface  negative regulation of coagulation  leukocyte migration  extracellular exosome  
Ontology : EGO-EBIreceptor activity  protein binding  extracellular region  centrosome  plasma membrane  integral component of plasma membrane  focal adhesion  blood coagulation  cell surface  negative regulation of coagulation  leukocyte migration  extracellular exosome  
Pathways : BIOCARTATranscriptional activation of dbpb from mRNA [Genes]   
NDEx NetworkPROCR
Atlas of Cancer Signalling NetworkPROCR
Wikipedia pathwaysPROCR
Orthology - Evolution
OrthoDB10544
GeneTree (enSembl)ENSG00000101000
Phylogenetic Trees/Animal Genes : TreeFamPROCR
HOVERGENQ9UNN8
HOGENOMQ9UNN8
Homologs : HomoloGenePROCR
Homology/Alignments : Family Browser (UCSC)PROCR
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPROCR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PROCR
dbVarPROCR
ClinVarPROCR
1000_GenomesPROCR 
Exome Variant ServerPROCR
ExAC (Exome Aggregation Consortium)PROCR (select the gene name)
Genetic variants : HAPMAP10544
Genomic Variants (DGV)PROCR [DGVbeta]
DECIPHERPROCR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPROCR 
Mutations
ICGC Data PortalPROCR 
TCGA Data PortalPROCR 
Broad Tumor PortalPROCR
OASIS PortalPROCR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPROCR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPROCR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PROCR
DgiDB (Drug Gene Interaction Database)PROCR
DoCM (Curated mutations)PROCR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PROCR (select a term)
intoGenPROCR
Cancer3DPROCR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600646   
Orphanet
MedgenPROCR
Genetic Testing Registry PROCR
NextProtQ9UNN8 [Medical]
TSGene10544
GENETestsPROCR
Target ValidationPROCR
Huge Navigator PROCR [HugePedia]
snp3D : Map Gene to Disease10544
BioCentury BCIQPROCR
ClinGenPROCR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10544
Chemical/Pharm GKB GenePA33800
Clinical trialPROCR
Miscellaneous
canSAR (ICR)PROCR (select the gene name)
Probes
Litterature
PubMed178 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePROCR
EVEXPROCR
GoPubMedPROCR
iHOPPROCR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:51:12 CEST 2017

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