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PROSER2 (proline and serine rich 2)

Identity

Alias (NCBI)C10orf47
HGNC (Hugo) PROSER2
HGNC Alias symbMGC35403
HGNC Previous nameC10orf47
HGNC Previous namechromosome 10 open reading frame 47
 proline and serine-rich protein 2
LocusID (NCBI) 254427
Atlas_Id 72245
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 11823356 and ends at 11872277 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PROSER2   23728
Cards
Entrez_Gene (NCBI)PROSER2    proline and serine rich 2
AliasesC10orf47
GeneCards (Weizmann)PROSER2
Ensembl hg19 (Hinxton)ENSG00000148426 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148426 [Gene_View]  ENSG00000148426 [Sequence]  chr10:11823356-11872277 [Contig_View]  PROSER2 [Vega]
ICGC DataPortalENSG00000148426
TCGA cBioPortalPROSER2
AceView (NCBI)PROSER2
Genatlas (Paris)PROSER2
SOURCE (Princeton)PROSER2
Genetics Home Reference (NIH)PROSER2
Genomic and cartography
GoldenPath hg38 (UCSC)PROSER2  -     chr10:11823356-11872277 +  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PROSER2  -     10p14   [Description]    (hg19-Feb_2009)
GoldenPathPROSER2 - 10p14 [CytoView hg19]  PROSER2 - 10p14 [CytoView hg38]
ImmunoBaseENSG00000148426
Genome Data Viewer NCBIPROSER2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC007547 BC017269 BC029134 BC040040 BC048800
RefSeq transcript (Entrez)NM_153256
Consensus coding sequences : CCDS (NCBI)PROSER2
Gene ExpressionPROSER2 [ NCBI-GEO ]   PROSER2 [ EBI - ARRAY_EXPRESS ]   PROSER2 [ SEEK ]   PROSER2 [ MEM ]
Gene Expression Viewer (FireBrowse)PROSER2 [ Firebrowse - Broad ]
GenevisibleExpression of PROSER2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254427
GTEX Portal (Tissue expression)PROSER2
Human Protein AtlasENSG00000148426-PROSER2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86WR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86WR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86WR7
PhosPhoSitePlusQ86WR7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PROSER2
SuperfamilyQ86WR7
AlphaFold pdb e-kbQ86WR7   
Human Protein Atlas [tissue]ENSG00000148426-PROSER2 [tissue]
HPRD10697
Protein Interaction databases
DIP (DOE-UCLA)Q86WR7
IntAct (EBI)Q86WR7
BioGRIDPROSER2
STRING (EMBL)PROSER2
ZODIACPROSER2
Ontologies - Pathways
QuickGOQ86WR7
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkPROSER2
Atlas of Cancer Signalling NetworkPROSER2
Wikipedia pathwaysPROSER2
Orthology - Evolution
OrthoDB254427
GeneTree (enSembl)ENSG00000148426
Phylogenetic Trees/Animal Genes : TreeFamPROSER2
Homologs : HomoloGenePROSER2
Homology/Alignments : Family Browser (UCSC)PROSER2
Gene fusions - Rearrangements
Fusion : QuiverPROSER2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPROSER2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PROSER2
dbVarPROSER2
ClinVarPROSER2
MonarchPROSER2
1000_GenomesPROSER2 
Exome Variant ServerPROSER2
GNOMAD BrowserENSG00000148426
Varsome BrowserPROSER2
ACMGPROSER2 variants
VarityQ86WR7
Genomic Variants (DGV)PROSER2 [DGVbeta]
DECIPHERPROSER2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPROSER2 
Mutations
ICGC Data PortalPROSER2 
TCGA Data PortalPROSER2 
Broad Tumor PortalPROSER2
OASIS PortalPROSER2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPROSER2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPROSER2
Mutations and Diseases : HGMDPROSER2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPROSER2
DgiDB (Drug Gene Interaction Database)PROSER2
DoCM (Curated mutations)PROSER2
CIViC (Clinical Interpretations of Variants in Cancer)PROSER2
Cancer3DPROSER2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPROSER2
MedgenPROSER2
Genetic Testing Registry PROSER2
NextProtQ86WR7 [Medical]
GENETestsPROSER2
Target ValidationPROSER2
Huge Navigator PROSER2 [HugePedia]
ClinGenPROSER2
Clinical trials, drugs, therapy
MyCancerGenomePROSER2
Protein Interactions : CTDPROSER2
Pharm GKB GenePA134910296
PharosQ86WR7
Clinical trialPROSER2
Miscellaneous
canSAR (ICR)PROSER2
HarmonizomePROSER2
DataMed IndexPROSER2
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPROSER2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:17:13 CEST 2021

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