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PROSER3 (proline and serine rich 3)

Identity

Alias_namesC19orf55
chromosome 19 open reading frame 55
Alias_symbol (synonym)FLJ30657
Other alias
HGNC (Hugo) PROSER3
LocusID (NCBI) 148137
Atlas_Id 72247
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35758143 and ends at 35769175 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PROSER3 (19q13.12) / IGFLR1 (19q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PROSER3   25204
Cards
Entrez_Gene (NCBI)PROSER3  148137  proline and serine rich 3
AliasesC19orf55
GeneCards (Weizmann)PROSER3
Ensembl hg19 (Hinxton)ENSG00000167595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167595 [Gene_View]  chr19:35758143-35769175 [Contig_View]  PROSER3 [Vega]
ICGC DataPortalENSG00000167595
TCGA cBioPortalPROSER3
AceView (NCBI)PROSER3
Genatlas (Paris)PROSER3
WikiGenes148137
SOURCE (Princeton)PROSER3
Genetics Home Reference (NIH)PROSER3
Genomic and cartography
GoldenPath hg38 (UCSC)PROSER3  -     chr19:35758143-35769175 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PROSER3  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblPROSER3 - 19q13.12 [CytoView hg19]  PROSER3 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIPROSER3 [Mapview hg19]  PROSER3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055219 AK124144 AL833894 BC017947 BC110893
RefSeq transcript (Entrez)NM_001039887 NM_144692
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PROSER3
Cluster EST : UnigeneHs.527982 [ NCBI ]
CGAP (NCI)Hs.527982
Alternative Splicing GalleryENSG00000167595
Gene ExpressionPROSER3 [ NCBI-GEO ]   PROSER3 [ EBI - ARRAY_EXPRESS ]   PROSER3 [ SEEK ]   PROSER3 [ MEM ]
Gene Expression Viewer (FireBrowse)PROSER3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148137
GTEX Portal (Tissue expression)PROSER3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2NL68   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2NL68  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2NL68
Splice isoforms : SwissVarQ2NL68
PhosPhoSitePlusQ2NL68
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PROSER3
DMDM Disease mutations148137
Blocks (Seattle)PROSER3
SuperfamilyQ2NL68
Human Protein AtlasENSG00000167595
Peptide AtlasQ2NL68
HPRD14079
IPIIPI00718821   IPI00043737   IPI00386066   IPI00855866   IPI01022578   IPI01012087   IPI01018926   IPI01018982   IPI01010874   
Protein Interaction databases
DIP (DOE-UCLA)Q2NL68
IntAct (EBI)Q2NL68
FunCoupENSG00000167595
BioGRIDPROSER3
STRING (EMBL)PROSER3
ZODIACPROSER3
Ontologies - Pathways
QuickGOQ2NL68
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPROSER3
Atlas of Cancer Signalling NetworkPROSER3
Wikipedia pathwaysPROSER3
Orthology - Evolution
OrthoDB148137
GeneTree (enSembl)ENSG00000167595
Phylogenetic Trees/Animal Genes : TreeFamPROSER3
HOVERGENQ2NL68
HOGENOMQ2NL68
Homologs : HomoloGenePROSER3
Homology/Alignments : Family Browser (UCSC)PROSER3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPROSER3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PROSER3
dbVarPROSER3
ClinVarPROSER3
1000_GenomesPROSER3 
Exome Variant ServerPROSER3
ExAC (Exome Aggregation Consortium)PROSER3 (select the gene name)
Genetic variants : HAPMAP148137
Genomic Variants (DGV)PROSER3 [DGVbeta]
DECIPHERPROSER3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPROSER3 
Mutations
ICGC Data PortalPROSER3 
TCGA Data PortalPROSER3 
Broad Tumor PortalPROSER3
OASIS PortalPROSER3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPROSER3
BioMutasearch PROSER3
DgiDB (Drug Gene Interaction Database)PROSER3
DoCM (Curated mutations)PROSER3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PROSER3 (select a term)
intoGenPROSER3
Cancer3DPROSER3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPROSER3
Genetic Testing Registry PROSER3
NextProtQ2NL68 [Medical]
TSGene148137
GENETestsPROSER3
Target ValidationPROSER3
Huge Navigator PROSER3 [HugePedia]
snp3D : Map Gene to Disease148137
BioCentury BCIQPROSER3
ClinGenPROSER3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148137
Chemical/Pharm GKB GenePA162378639
Clinical trialPROSER3
Miscellaneous
canSAR (ICR)PROSER3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePROSER3
EVEXPROSER3
GoPubMedPROSER3
iHOPPROSER3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:37:27 CEST 2017

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