PRPF8 (PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae))

Identity

Other names	HPRP8
	PRP8
	PRPC8
	RP13
HGNC	PRPF8
Location	17p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PRPF8   17340
Entrez_Gene	PRPF8  10594  PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
	Cards
GeneCards	PRPF8
Ensembl	PRPF8 [Search_View]   ENSG00000174231 [Gene_View]
Genatlas	PRPF8
GeneLynx	PRPF8
eGenome	PRPF8
euGene	10594
	Genomic and cartography
GoldenPath	PRPF8  -  17p13.3   chr17:1500673-1534926 -  17p13.3   [Description]    (hg18-March_2006)
Ensembl	PRPF8 - 17p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PRPF8
	Gene and transcription
Genbank	AB007510 [ ENTREZ ]
Genbank	AF092565 [ ENTREZ ]
Genbank	AK058034 [ ENTREZ ]
Genbank	AK126169 [ ENTREZ ]
Genbank	AK222905 [ ENTREZ ]
RefSeq	NM_006445 [ SRS ]    NM_006445 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	PRPF8 AceView - NCBI
Unigene	Hs.181368 [ SRS ]    Hs.181368 [ NCBI ]     HS181368 [ spliceNest ]
Fast-db	531 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q53GM6 [ SRS]    Q53GM6 [ EXPASY ]     Q53GM6 [ INTERPRO ]     Q53GM6 [ UNIPROT ]
Interpro	IPR000555 Mov34_MPN_PAD1 [ SRS ]    IPR000555 Mov34_MPN_PAD1 [ EBI ]
Interpro	IPR012984 PRO_C [ SRS ]    IPR012984 PRO_C [ EBI ]
CluSTr	Q53GM6
Pfam	PF01398 Mov34 [ SRS ]    PF01398 Mov34 [ Sanger ]    pfam01398 [ NCBI-CDD ]
Pfam	PF08084 PROCT [ SRS ]    PF08084 PROCT [ Sanger ]    pfam08084 [ NCBI-CDD ]
Smart	SM00232 JAB_MPN [EMBL]
Blocks	Q53GM6
HPRD	06295
	Protein Interaction databases
DIP	Q53GM6
IntAct	Q53GM6
	Polymorphism : SNP, mutations, diseases
OMIM	600059;607300    [ map ]
GENECLINICS	600059;607300
SNP	PRPF8 [dbSNP-NCBI]
SNP	NM_006445 [SNP-NCI]
SNP	PRPF8 [GeneSNPs - Utah]  PRPF8] [HGBASE - SRS]
HAPMAP	PRPF8 [HAPMAP]
HGMD	PRPF8
	General knowledge
Family Browser	PRPF8 [UCSC Family Browser]
SOURCE	NM_006445
SMD	Hs.181368
SAGE	Hs.181368
GO	nuclear mRNA splicing, via spliceosome [Amigo]  nuclear mRNA splicing, via spliceosome
GO	nuclear mRNA splicing, via spliceosome [Amigo]  nuclear mRNA splicing, via spliceosome
GO	RNA binding [Amigo]  RNA binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	spliceosome [Amigo]  spliceosome
GO	snRNP U5 [Amigo]  snRNP U5
GO	visual perception [Amigo]  visual perception
GO	RNA splicing [Amigo]  RNA splicing
GO	nuclear speck [Amigo]  nuclear speck
GO	RNA splicing factor activity, transesterification mechanism [Amigo]  RNA splicing factor activity, transesterification mechanism
GO	response to stimulus [Amigo]  response to stimulus
PubGene	PRPF8
TreeFam	PRPF8
CTD	10594 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PRPF8 Related clones (RZPD - Berlin)
	PubMed
PubMed	37 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 18:16:43 2008