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PRR21 (proline rich 21)

Identity

Other alias-
HGNC (Hugo) PRR21
LocusID (NCBI) 643905
Atlas_Id 72270
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 240981230 and ends at 240982399 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRR21   33866
Cards
Entrez_Gene (NCBI)PRR21  643905  proline rich 21
Aliases
GeneCards (Weizmann)PRR21
Ensembl hg19 (Hinxton)ENSG00000221961 [Gene_View]  chr2:240981230-240982399 [Contig_View]  PRR21 [Vega]
Ensembl hg38 (Hinxton)ENSG00000221961 [Gene_View]  chr2:240981230-240982399 [Contig_View]  PRR21 [Vega]
ICGC DataPortalENSG00000221961
TCGA cBioPortalPRR21
AceView (NCBI)PRR21
Genatlas (Paris)PRR21
WikiGenes643905
SOURCE (Princeton)PRR21
Genetics Home Reference (NIH)PRR21
Genomic and cartography
GoldenPath hg19 (UCSC)PRR21  -     chr2:240981230-240982399 -  2q37.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PRR21  -     2q37.3   [Description]    (hg38-Dec_2013)
EnsemblPRR21 - 2q37.3 [CytoView hg19]  PRR21 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIPRR21 [Mapview hg19]  PRR21 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001080835
RefSeq genomic (Entrez)NC_000002 NT_005403
Consensus coding sequences : CCDS (NCBI)PRR21
Cluster EST : UnigeneHs.693479 [ NCBI ]
CGAP (NCI)Hs.693479
Alternative Splicing GalleryENSG00000221961
Gene ExpressionPRR21 [ NCBI-GEO ]   PRR21 [ EBI - ARRAY_EXPRESS ]   PRR21 [ SEEK ]   PRR21 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643905
GTEX Portal (Tissue expression)PRR21
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXC7
Splice isoforms : SwissVarQ8WXC7
PhosPhoSitePlusQ8WXC7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR21
DMDM Disease mutations643905
Blocks (Seattle)PRR21
SuperfamilyQ8WXC7
Human Protein AtlasENSG00000221961
Peptide AtlasQ8WXC7
IPIIPI00103508   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXC7
IntAct (EBI)Q8WXC7
FunCoupENSG00000221961
BioGRIDPRR21
STRING (EMBL)PRR21
ZODIACPRR21
Ontologies - Pathways
QuickGOQ8WXC7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPRR21
Atlas of Cancer Signalling NetworkPRR21
Wikipedia pathwaysPRR21
Orthology - Evolution
OrthoDB643905
GeneTree (enSembl)ENSG00000221961
Phylogenetic Trees/Animal Genes : TreeFamPRR21
HOVERGENQ8WXC7
HOGENOMQ8WXC7
Homologs : HomoloGenePRR21
Homology/Alignments : Family Browser (UCSC)PRR21
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRR21 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRR21
dbVarPRR21
ClinVarPRR21
1000_GenomesPRR21 
Exome Variant ServerPRR21
ExAC (Exome Aggregation Consortium)PRR21 (select the gene name)
Genetic variants : HAPMAP643905
Genomic Variants (DGV)PRR21 [DGVbeta]
DECIPHER (Syndromes)2:240981230-240982399  ENSG00000221961
CONAN: Copy Number AnalysisPRR21 
Mutations
ICGC Data PortalPRR21 
TCGA Data PortalPRR21 
Broad Tumor PortalPRR21
OASIS PortalPRR21 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRR21  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPRR21
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRR21
DgiDB (Drug Gene Interaction Database)PRR21
DoCM (Curated mutations)PRR21 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRR21 (select a term)
intoGenPRR21
Cancer3DPRR21(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPRR21
Genetic Testing Registry PRR21
NextProtQ8WXC7 [Medical]
TSGene643905
GENETestsPRR21
Huge Navigator PRR21 [HugePedia]
snp3D : Map Gene to Disease643905
BioCentury BCIQPRR21
ClinGenPRR21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643905
Chemical/Pharm GKB GenePA165697417
Clinical trialPRR21
Miscellaneous
canSAR (ICR)PRR21 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR21
EVEXPRR21
GoPubMedPRR21
iHOPPRR21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:39:50 CET 2017

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