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PRR26 (proline rich 26)

Identity

Alias_namesC10orf108
chromosome 10 open reading frame 108
Alias_symbol (synonym)FLJ38681
Other alias
HGNC (Hugo) PRR26
LocusID (NCBI) 414235
Atlas_Id 78151
Location 10p15.3  [Link to chromosome band 10p15]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRR26   30724
Cards
Entrez_Gene (NCBI)PRR26  414235  proline rich 26
AliasesC10orf108
GeneCards (Weizmann)PRR26
Ensembl hg19 (Hinxton)ENSG00000180525 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180525 [Gene_View]  - [Contig_View]  PRR26 [Vega]
ICGC DataPortalENSG00000180525
TCGA cBioPortalPRR26
AceView (NCBI)PRR26
Genatlas (Paris)PRR26
WikiGenes414235
SOURCE (Princeton)PRR26
Genetics Home Reference (NIH)PRR26
Genomic and cartography
GoldenPath hg38 (UCSC)PRR26  -  
GoldenPath hg19 (UCSC)PRR26  -  
EnsemblPRR26 - [CytoView hg19]  PRR26 - [CytoView hg38]
Mapping of homologs : NCBIPRR26 [Mapview hg19]  PRR26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA877122 AK096000 AK096013 AK296168 BC042561
RefSeq transcript (Entrez)NM_001012714
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRR26
Cluster EST : UnigeneHs.587103 [ NCBI ]
CGAP (NCI)Hs.587103
Alternative Splicing GalleryENSG00000180525
Gene ExpressionPRR26 [ NCBI-GEO ]   PRR26 [ EBI - ARRAY_EXPRESS ]   PRR26 [ SEEK ]   PRR26 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414235
GTEX Portal (Tissue expression)PRR26
Human Protein AtlasENSG00000180525-PRR26 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8Z3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8Z3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8Z3
Splice isoforms : SwissVarQ8N8Z3
PhosPhoSitePlusQ8N8Z3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR26
DMDM Disease mutations414235
Blocks (Seattle)PRR26
SuperfamilyQ8N8Z3
Human Protein Atlas [tissue]ENSG00000180525-PRR26 [tissue]
Peptide AtlasQ8N8Z3
HPRD18528
IPIIPI00167655   IPI00298420   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8Z3
IntAct (EBI)Q8N8Z3
FunCoupENSG00000180525
BioGRIDPRR26
STRING (EMBL)PRR26
ZODIACPRR26
Ontologies - Pathways
QuickGOQ8N8Z3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPRR26
Atlas of Cancer Signalling NetworkPRR26
Wikipedia pathwaysPRR26
Orthology - Evolution
OrthoDB414235
GeneTree (enSembl)ENSG00000180525
Phylogenetic Trees/Animal Genes : TreeFamPRR26
HOVERGENQ8N8Z3
HOGENOMQ8N8Z3
Homologs : HomoloGenePRR26
Homology/Alignments : Family Browser (UCSC)PRR26
Gene fusions - Rearrangements
Tumor Fusion PortalPRR26
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRR26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRR26
dbVarPRR26
ClinVarPRR26
1000_GenomesPRR26 
Exome Variant ServerPRR26
ExAC (Exome Aggregation Consortium)ENSG00000180525
GNOMAD BrowserENSG00000180525
Genetic variants : HAPMAP414235
Genomic Variants (DGV)PRR26 [DGVbeta]
DECIPHERPRR26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRR26 
Mutations
ICGC Data PortalPRR26 
TCGA Data PortalPRR26 
Broad Tumor PortalPRR26
OASIS PortalPRR26 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPRR26
BioMutasearch PRR26
DgiDB (Drug Gene Interaction Database)PRR26
DoCM (Curated mutations)PRR26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRR26 (select a term)
intoGenPRR26
Cancer3DPRR26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPRR26
MedgenPRR26
Genetic Testing Registry PRR26
NextProtQ8N8Z3 [Medical]
TSGene414235
GENETestsPRR26
Target ValidationPRR26
Huge Navigator PRR26 [HugePedia]
snp3D : Map Gene to Disease414235
BioCentury BCIQPRR26
ClinGenPRR26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414235
Chemical/Pharm GKB GenePA134891125
Clinical trialPRR26
Miscellaneous
canSAR (ICR)PRR26 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR26
EVEXPRR26
GoPubMedPRR26
iHOPPRR26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:22:26 CET 2017

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