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PRR31 (proline rich 31)

Identity

Alias_namesC9orf141
chromosome 9 open reading frame 141
Other alias
HGNC (Hugo) PRR31
LocusID (NCBI) 101928638
Atlas_Id 79628
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136969368 and ends at 136972884 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PRR31   18147
Cards
Entrez_Gene (NCBI)PRR31  101928638  proline rich 31
AliasesC9orf141
GeneCards (Weizmann)PRR31
Ensembl hg19 (Hinxton)ENSG00000198454 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198454 [Gene_View]  chr9:136969368-136972884 [Contig_View]  PRR31 [Vega]
ICGC DataPortalENSG00000198454
TCGA cBioPortalPRR31
AceView (NCBI)PRR31
Genatlas (Paris)PRR31
WikiGenes101928638
SOURCE (Princeton)PRR31
Genetics Home Reference (NIH)PRR31
Genomic and cartography
GoldenPath hg38 (UCSC)PRR31  -     chr9:136969368-136972884 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRR31  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblPRR31 - 9q34.3 [CytoView hg19]  PRR31 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIPRR31 [Mapview hg19]  PRR31 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI825966 BI832003
RefSeq transcript (Entrez)NM_001101674 NM_001351145
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRR31
Cluster EST : UnigeneHs.448074 [ NCBI ]
CGAP (NCI)Hs.448074
Alternative Splicing GalleryENSG00000198454
Gene ExpressionPRR31 [ NCBI-GEO ]   PRR31 [ EBI - ARRAY_EXPRESS ]   PRR31 [ SEEK ]   PRR31 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928638
GTEX Portal (Tissue expression)PRR31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5SQ13   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5SQ13  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5SQ13
Splice isoforms : SwissVarQ5SQ13
PhosPhoSitePlusQ5SQ13
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR31
DMDM Disease mutations101928638
Blocks (Seattle)PRR31
SuperfamilyQ5SQ13
Human Protein AtlasENSG00000198454
Peptide AtlasQ5SQ13
Protein Interaction databases
DIP (DOE-UCLA)Q5SQ13
IntAct (EBI)Q5SQ13
FunCoupENSG00000198454
BioGRIDPRR31
STRING (EMBL)PRR31
ZODIACPRR31
Ontologies - Pathways
QuickGOQ5SQ13
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPRR31
Atlas of Cancer Signalling NetworkPRR31
Wikipedia pathwaysPRR31
Orthology - Evolution
OrthoDB101928638
GeneTree (enSembl)ENSG00000198454
Phylogenetic Trees/Animal Genes : TreeFamPRR31
HOVERGENQ5SQ13
HOGENOMQ5SQ13
Homologs : HomoloGenePRR31
Homology/Alignments : Family Browser (UCSC)PRR31
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRR31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRR31
dbVarPRR31
ClinVarPRR31
1000_GenomesPRR31 
Exome Variant ServerPRR31
ExAC (Exome Aggregation Consortium)PRR31 (select the gene name)
Genetic variants : HAPMAP101928638
Genomic Variants (DGV)PRR31 [DGVbeta]
DECIPHERPRR31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRR31 
Mutations
ICGC Data PortalPRR31 
TCGA Data PortalPRR31 
Broad Tumor PortalPRR31
OASIS PortalPRR31 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPRR31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRR31
DgiDB (Drug Gene Interaction Database)PRR31
DoCM (Curated mutations)PRR31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRR31 (select a term)
intoGenPRR31
Cancer3DPRR31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPRR31
Genetic Testing Registry PRR31
NextProtQ5SQ13 [Medical]
TSGene101928638
GENETestsPRR31
Target ValidationPRR31
Huge Navigator PRR31 [HugePedia]
snp3D : Map Gene to Disease101928638
BioCentury BCIQPRR31
ClinGenPRR31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928638
Clinical trialPRR31
Miscellaneous
canSAR (ICR)PRR31 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR31
EVEXPRR31
GoPubMedPRR31
iHOPPRR31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:25 CEST 2017

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