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PRR34-AS1 (PRR34 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PRR34-AS1
LocusID (NCBI) 150381
Atlas_Id 72284
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 46053846 and ends at 46058522 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRR34-AS1   50499
Cards
Entrez_Gene (NCBI)PRR34-AS1  150381  PRR34 antisense RNA 1
Aliases
GeneCards (Weizmann)PRR34-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:46053846-46058522 [Contig_View]  PRR34-AS1 [Vega]
TCGA cBioPortalPRR34-AS1
AceView (NCBI)PRR34-AS1
Genatlas (Paris)PRR34-AS1
WikiGenes150381
SOURCE (Princeton)PRR34-AS1
Genetics Home Reference (NIH)PRR34-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PRR34-AS1  -     chr22:46053846-46058522 +  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRR34-AS1  -     22q13.31   [Description]    (hg19-Feb_2009)
EnsemblPRR34-AS1 - 22q13.31 [CytoView hg19]  PRR34-AS1 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBIPRR34-AS1 [Mapview hg19]  PRR34-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM666595 CR986432
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRR34-AS1
Cluster EST : UnigeneHs.659113 [ NCBI ]
CGAP (NCI)Hs.659113
Gene ExpressionPRR34-AS1 [ NCBI-GEO ]   PRR34-AS1 [ EBI - ARRAY_EXPRESS ]   PRR34-AS1 [ SEEK ]   PRR34-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR34-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)150381
GTEX Portal (Tissue expression)PRR34-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR34-AS1
DMDM Disease mutations150381
Blocks (Seattle)PRR34-AS1
Protein Interaction databases
BioGRIDPRR34-AS1
STRING (EMBL)PRR34-AS1
ZODIACPRR34-AS1
Ontologies - Pathways
Huge Navigator PRR34-AS1 [HugePedia]
snp3D : Map Gene to Disease150381
BioCentury BCIQPRR34-AS1
ClinGenPRR34-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150381
Clinical trialPRR34-AS1
Miscellaneous
canSAR (ICR)PRR34-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR34-AS1
EVEXPRR34-AS1
GoPubMedPRR34-AS1
iHOPPRR34-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:12 CET 2017

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