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PRR5-ARHGAP8 (PRR5-ARHGAP8 readthrough)

Identity

Other alias-
HGNC (Hugo) PRR5-ARHGAP8
LocusID (NCBI) 553158
Atlas_Id 72288
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 45098078 and ends at 45258664 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PRR5-ARHGAP8 (22q13.31) / XRCC6 (22q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRR5-ARHGAP8   34512
Cards
Entrez_Gene (NCBI)PRR5-ARHGAP8  553158  PRR5-ARHGAP8 readthrough
Aliases
GeneCards (Weizmann)PRR5-ARHGAP8
Ensembl hg19 (Hinxton)ENSG00000248405 [Gene_View]  chr22:45098078-45258664 [Contig_View]  PRR5-ARHGAP8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248405 [Gene_View]  chr22:45098078-45258664 [Contig_View]  PRR5-ARHGAP8 [Vega]
ICGC DataPortalENSG00000248405
TCGA cBioPortalPRR5-ARHGAP8
AceView (NCBI)PRR5-ARHGAP8
Genatlas (Paris)PRR5-ARHGAP8
WikiGenes553158
SOURCE (Princeton)PRR5-ARHGAP8
Genetics Home Reference (NIH)PRR5-ARHGAP8
Genomic and cartography
GoldenPath hg19 (UCSC)PRR5-ARHGAP8  -     chr22:45098078-45258664 +  22q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PRR5-ARHGAP8  -     22q13.31   [Description]    (hg38-Dec_2013)
EnsemblPRR5-ARHGAP8 - 22q13.31 [CytoView hg19]  PRR5-ARHGAP8 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBIPRR5-ARHGAP8 [Mapview hg19]  PRR5-ARHGAP8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF195968 AF195969 AL355192 BC132755 BC132757
RefSeq transcript (Entrez)NM_181334
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)PRR5-ARHGAP8
Cluster EST : UnigeneHs.102336 [ NCBI ]
CGAP (NCI)Hs.102336
Alternative Splicing GalleryENSG00000248405
Gene ExpressionPRR5-ARHGAP8 [ NCBI-GEO ]   PRR5-ARHGAP8 [ EBI - ARRAY_EXPRESS ]   PRR5-ARHGAP8 [ SEEK ]   PRR5-ARHGAP8 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR5-ARHGAP8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)553158
GTEX Portal (Tissue expression)PRR5-ARHGAP8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR5-ARHGAP8
DMDM Disease mutations553158
Blocks (Seattle)PRR5-ARHGAP8
Human Protein AtlasENSG00000248405
HPRD18688
IPIIPI00216062   IPI00868745   IPI00983963   IPI00965934   IPI00903206   IPI00472223   IPI00893749   IPI00856035   IPI00893984   IPI00980769   IPI01011612   IPI00744264   
Protein Interaction databases
FunCoupENSG00000248405
BioGRIDPRR5-ARHGAP8
STRING (EMBL)PRR5-ARHGAP8
ZODIACPRR5-ARHGAP8
Ontologies - Pathways
Huge Navigator PRR5-ARHGAP8 [HugePedia]
snp3D : Map Gene to Disease553158
BioCentury BCIQPRR5-ARHGAP8
ClinGenPRR5-ARHGAP8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD553158
Clinical trialPRR5-ARHGAP8
Miscellaneous
canSAR (ICR)PRR5-ARHGAP8 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR5-ARHGAP8
EVEXPRR5-ARHGAP8
GoPubMedPRR5-ARHGAP8
iHOPPRR5-ARHGAP8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:39:54 CET 2017

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