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PRR7-AS1 (PRR7 antisense RNA 1)

Identity

Alias_namesPRR7 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) PRR7-AS1
LocusID (NCBI) 340037
Atlas_Id 72291
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 177437889 and ends at 177447944 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRR7-AS1   27961
Cards
Entrez_Gene (NCBI)PRR7-AS1  340037  PRR7 antisense RNA 1
Aliases
GeneCards (Weizmann)PRR7-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:177437889-177447944 [Contig_View]  PRR7-AS1 [Vega]
TCGA cBioPortalPRR7-AS1
AceView (NCBI)PRR7-AS1
Genatlas (Paris)PRR7-AS1
WikiGenes340037
SOURCE (Princeton)PRR7-AS1
Genetics Home Reference (NIH)PRR7-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PRR7-AS1  -     chr5:177437889-177447944 -  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRR7-AS1  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblPRR7-AS1 - 5q35.3 [CytoView hg19]  PRR7-AS1 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIPRR7-AS1 [Mapview hg19]  PRR7-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041422 BM083785
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRR7-AS1
Cluster EST : UnigeneHs.738026 [ NCBI ]
CGAP (NCI)Hs.738026
Gene ExpressionPRR7-AS1 [ NCBI-GEO ]   PRR7-AS1 [ EBI - ARRAY_EXPRESS ]   PRR7-AS1 [ SEEK ]   PRR7-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRR7-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340037
GTEX Portal (Tissue expression)PRR7-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRR7-AS1
DMDM Disease mutations340037
Blocks (Seattle)PRR7-AS1
Protein Interaction databases
BioGRIDPRR7-AS1
STRING (EMBL)PRR7-AS1
ZODIACPRR7-AS1
Ontologies - Pathways
Huge Navigator PRR7-AS1 [HugePedia]
snp3D : Map Gene to Disease340037
BioCentury BCIQPRR7-AS1
ClinGenPRR7-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340037
Clinical trialPRR7-AS1
Miscellaneous
canSAR (ICR)PRR7-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRR7-AS1
EVEXPRR7-AS1
GoPubMedPRR7-AS1
iHOPPRR7-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Nov 20 20:08:35 CET 2017

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