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PRRC2C (proline rich coiled-coil 2C)

Identity

Alias (NCBI)BAT2-iso
BAT2D1
BAT2L2
XTP2
HGNC (Hugo) PRRC2C
HGNC Alias symbKIAA1096
XTP2
HGNC Previous nameBAT2D1
 BAT2L2
HGNC Previous nameBAT2 domain containing 1
 HLA-B associated transcript 2-like 2
 proline-rich coiled-coil 2C
LocusID (NCBI) 23215
Atlas_Id 51834
Location 1q24.3  [Link to chromosome band 1q24]
Location_base_pair Starts at 171485530 and ends at 171593511 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
APLP2 (11q24.3) / PRRC2C (1q24.3)DYRK1A (21q22.13) / PRRC2C (1q24.3)MOB2 (11p15.5) / PRRC2C (1q24.3)
NBAS (2p24.3) / PRRC2C (1q24.3)PRH1-PRR4 (12p13.2) / PRRC2C (1q24.3)PRRC2C (1q24.3) / CENPL (1q25.1)
PRRC2C (1q24.3) / COL3A1 (2q32.2)PRRC2C (1q24.3) / CSTF1 (20q13.2)PRRC2C (1q24.3) / FASLG (1q24.3)
PRRC2C (1q24.3) / MTHFD1 (14q23.3)PRRC2C (1q24.3) / PHLDA1 (12q21.2)PRRC2C (1q24.3) / PRRC2C (1q24.3)
PRRC2C (1q24.3) / TGOLN2 (2p11.2)PRRC2C (1q24.3) / ZC3H13 (13q14.13)SPATA13 (13q12.12) / PRRC2C (1q24.3)
STOM (9q33.2) / PRRC2C (1q24.3)PRRC2C 1q24.3 / CENPL 1q25.1PRRC2C 1q24.3 / FASLG 1q24.3
SPATA13 13q12.12 / PRRC2C 1q24.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PRRC2C   24903
Cards
Entrez_Gene (NCBI)PRRC2C    proline rich coiled-coil 2C
AliasesBAT2-iso; BAT2D1; BAT2L2; XTP2
GeneCards (Weizmann)PRRC2C
Ensembl hg19 (Hinxton)ENSG00000117523 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117523 [Gene_View]  ENSG00000117523 [Sequence]  chr1:171485530-171593511 [Contig_View]  PRRC2C [Vega]
ICGC DataPortalENSG00000117523
TCGA cBioPortalPRRC2C
AceView (NCBI)PRRC2C
Genatlas (Paris)PRRC2C
SOURCE (Princeton)PRRC2C
Genetics Home Reference (NIH)PRRC2C
Genomic and cartography
GoldenPath hg38 (UCSC)PRRC2C  -     chr1:171485530-171593511 +  1q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRRC2C  -     1q24.3   [Description]    (hg19-Feb_2009)
GoldenPathPRRC2C - 1q24.3 [CytoView hg19]  PRRC2C - 1q24.3 [CytoView hg38]
ImmunoBaseENSG00000117523
Genome Data Viewer NCBIPRRC2C [Mapview hg19]  
OMIM617373   
Gene and transcription
Genbank (Entrez)AB029019 AF253978 AF488829 AK000190 AK022492
RefSeq transcript (Entrez)NM_001387844 NM_015172
Consensus coding sequences : CCDS (NCBI)PRRC2C
Gene ExpressionPRRC2C [ NCBI-GEO ]   PRRC2C [ EBI - ARRAY_EXPRESS ]   PRRC2C [ SEEK ]   PRRC2C [ MEM ]
Gene Expression Viewer (FireBrowse)PRRC2C [ Firebrowse - Broad ]
GenevisibleExpression of PRRC2C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23215
GTEX Portal (Tissue expression)PRRC2C
Human Protein AtlasENSG00000117523-PRRC2C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRRC2C
Human Protein Atlas [tissue]ENSG00000117523-PRRC2C [tissue]
HPRD16539
Protein Interaction databases
BioGRIDPRRC2C
STRING (EMBL)PRRC2C
ZODIACPRRC2C
Ontologies - Pathways
Litterature
PubMed68 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRRC2C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:27:04 CEST 2021

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