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PRRG3 (proline rich and Gla domain 3)

Identity

Alias (NCBI)PRGP3
TMG3
HGNC (Hugo) PRRG3
HGNC Alias symbTMG3
HGNC Previous nameproline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
LocusID (NCBI) 79057
Atlas_Id 72294
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 151695258 and ends at 151701591 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PRRG3   30798
Cards
Entrez_Gene (NCBI)PRRG3    proline rich and Gla domain 3
AliasesPRGP3; TMG3
GeneCards (Weizmann)PRRG3
Ensembl hg19 (Hinxton)ENSG00000130032 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130032 [Gene_View]  ENSG00000130032 [Sequence]  chrX:151695258-151701591 [Contig_View]  PRRG3 [Vega]
ICGC DataPortalENSG00000130032
TCGA cBioPortalPRRG3
AceView (NCBI)PRRG3
Genatlas (Paris)PRRG3
SOURCE (Princeton)PRRG3
Genetics Home Reference (NIH)PRRG3
Genomic and cartography
GoldenPath hg38 (UCSC)PRRG3  -     chrX:151695258-151701591 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRRG3  -     Xq28   [Description]    (hg19-Feb_2009)
GoldenPathPRRG3 - Xq28 [CytoView hg19]  PRRG3 - Xq28 [CytoView hg38]
ImmunoBaseENSG00000130032
Genome Data Viewer NCBIPRRG3 [Mapview hg19]  
OMIM300685   
Gene and transcription
Genbank (Entrez)AF326350 AK074574 AK125352 BC128256 BC128409
RefSeq transcript (Entrez)NM_001372163 NM_001372165 NM_024082
Consensus coding sequences : CCDS (NCBI)PRRG3
Gene ExpressionPRRG3 [ NCBI-GEO ]   PRRG3 [ EBI - ARRAY_EXPRESS ]   PRRG3 [ SEEK ]   PRRG3 [ MEM ]
Gene Expression Viewer (FireBrowse)PRRG3 [ Firebrowse - Broad ]
GenevisibleExpression of PRRG3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79057
GTEX Portal (Tissue expression)PRRG3
Human Protein AtlasENSG00000130032-PRRG3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZD7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZD7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZD7
PhosPhoSitePlusQ9BZD7
Domaine pattern : Prosite (Expaxy)GLA_1 (PS00011)    GLA_2 (PS50998)   
Domains : Interpro (EBI)Coagulation_fac-like_Gla_dom    GLA-like_dom_SF    GLA_domain   
Domain families : Pfam (Sanger)Gla (PF00594)   
Domain families : Pfam (NCBI)pfam00594   
Domain families : Smart (EMBL)GLA (SM00069)  
Conserved Domain (NCBI)PRRG3
SuperfamilyQ9BZD7
AlphaFold pdb e-kbQ9BZD7   
Human Protein Atlas [tissue]ENSG00000130032-PRRG3 [tissue]
HPRD06742
Protein Interaction databases
DIP (DOE-UCLA)Q9BZD7
IntAct (EBI)Q9BZD7
BioGRIDPRRG3
STRING (EMBL)PRRG3
ZODIACPRRG3
Ontologies - Pathways
QuickGOQ9BZD7
Ontology : AmiGOcalcium ion binding  extracellular region  biological_process  integral component of membrane  
Ontology : EGO-EBIcalcium ion binding  extracellular region  biological_process  integral component of membrane  
NDEx NetworkPRRG3
Atlas of Cancer Signalling NetworkPRRG3
Wikipedia pathwaysPRRG3
Orthology - Evolution
OrthoDB79057
GeneTree (enSembl)ENSG00000130032
Phylogenetic Trees/Animal Genes : TreeFamPRRG3
Homologs : HomoloGenePRRG3
Homology/Alignments : Family Browser (UCSC)PRRG3
Gene fusions - Rearrangements
Fusion : QuiverPRRG3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRRG3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRRG3
dbVarPRRG3
ClinVarPRRG3
MonarchPRRG3
1000_GenomesPRRG3 
Exome Variant ServerPRRG3
GNOMAD BrowserENSG00000130032
Varsome BrowserPRRG3
ACMGPRRG3 variants
VarityQ9BZD7
Genomic Variants (DGV)PRRG3 [DGVbeta]
DECIPHERPRRG3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRRG3 
Mutations
ICGC Data PortalPRRG3 
TCGA Data PortalPRRG3 
Broad Tumor PortalPRRG3
OASIS PortalPRRG3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRRG3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPRRG3
Mutations and Diseases : HGMDPRRG3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPRRG3
DgiDB (Drug Gene Interaction Database)PRRG3
DoCM (Curated mutations)PRRG3
CIViC (Clinical Interpretations of Variants in Cancer)PRRG3
Cancer3DPRRG3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300685   
Orphanet
DisGeNETPRRG3
MedgenPRRG3
Genetic Testing Registry PRRG3
NextProtQ9BZD7 [Medical]
GENETestsPRRG3
Target ValidationPRRG3
Huge Navigator PRRG3 [HugePedia]
ClinGenPRRG3
Clinical trials, drugs, therapy
MyCancerGenomePRRG3
Protein Interactions : CTDPRRG3
Pharm GKB GenePA134963933
PharosQ9BZD7
Clinical trialPRRG3
Miscellaneous
canSAR (ICR)PRRG3
HarmonizomePRRG3
DataMed IndexPRRG3
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRRG3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:17:22 CEST 2021

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