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PRRX2-AS1 (PRRX2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PRRX2-AS1
LocusID (NCBI) 101929437
Atlas_Id 77802
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 129712894 and ends at 129718706 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRRX2-AS1   50684
Cards
Entrez_Gene (NCBI)PRRX2-AS1  101929437  PRRX2 antisense RNA 1
Aliases
GeneCards (Weizmann)PRRX2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:129712894-129718706 [Contig_View]  PRRX2-AS1 [Vega]
TCGA cBioPortalPRRX2-AS1
AceView (NCBI)PRRX2-AS1
Genatlas (Paris)PRRX2-AS1
WikiGenes101929437
SOURCE (Princeton)PRRX2-AS1
Genetics Home Reference (NIH)PRRX2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PRRX2-AS1  -     chr9:129712894-129718706 -  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRRX2-AS1  -     9q34.11   [Description]    (hg19-Feb_2009)
EnsemblPRRX2-AS1 - 9q34.11 [CytoView hg19]  PRRX2-AS1 - 9q34.11 [CytoView hg38]
Mapping of homologs : NCBIPRRX2-AS1 [Mapview hg19]  PRRX2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA993927 BX110190 HY035685
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRRX2-AS1
Cluster EST : UnigeneHs.112596 [ NCBI ]
CGAP (NCI)Hs.112596
Gene ExpressionPRRX2-AS1 [ NCBI-GEO ]   PRRX2-AS1 [ EBI - ARRAY_EXPRESS ]   PRRX2-AS1 [ SEEK ]   PRRX2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PRRX2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929437
GTEX Portal (Tissue expression)PRRX2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRRX2-AS1
DMDM Disease mutations101929437
Blocks (Seattle)PRRX2-AS1
Protein Interaction databases
BioGRIDPRRX2-AS1
STRING (EMBL)PRRX2-AS1
ZODIACPRRX2-AS1
Ontologies - Pathways
Huge Navigator PRRX2-AS1 [HugePedia]
snp3D : Map Gene to Disease101929437
BioCentury BCIQPRRX2-AS1
ClinGenPRRX2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929437
Clinical trialPRRX2-AS1
Miscellaneous
canSAR (ICR)PRRX2-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRRX2-AS1
EVEXPRRX2-AS1
GoPubMedPRRX2-AS1
iHOPPRRX2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:49:55 CEST 2017

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