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PRSS33 (protease, serine 33)

Identity

Alias_symbol (synonym)EOS
Other alias
HGNC (Hugo) PRSS33
LocusID (NCBI) 260429
Atlas_Id 72306
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2783953 and ends at 2786707 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SRRM2 (16p13.3) / PRSS33 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRSS33   30405
Cards
Entrez_Gene (NCBI)PRSS33  260429  protease, serine 33
AliasesEOS
GeneCards (Weizmann)PRSS33
Ensembl hg19 (Hinxton)ENSG00000103355 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103355 [Gene_View]  chr16:2783953-2786707 [Contig_View]  PRSS33 [Vega]
ICGC DataPortalENSG00000103355
TCGA cBioPortalPRSS33
AceView (NCBI)PRSS33
Genatlas (Paris)PRSS33
WikiGenes260429
SOURCE (Princeton)PRSS33
Genetics Home Reference (NIH)PRSS33
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS33  -     chr16:2783953-2786707 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS33  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblPRSS33 - 16p13.3 [CytoView hg19]  PRSS33 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIPRSS33 [Mapview hg19]  PRSS33 [Mapview hg38]
OMIM613797   
Gene and transcription
Genbank (Entrez)AF536382 BC036846 BC062334
RefSeq transcript (Entrez)NM_152891
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS33
Cluster EST : UnigeneHs.280658 [ NCBI ]
CGAP (NCI)Hs.280658
Alternative Splicing GalleryENSG00000103355
Gene ExpressionPRSS33 [ NCBI-GEO ]   PRSS33 [ EBI - ARRAY_EXPRESS ]   PRSS33 [ SEEK ]   PRSS33 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)260429
GTEX Portal (Tissue expression)PRSS33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NF86   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NF86  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NF86
Splice isoforms : SwissVarQ8NF86
Catalytic activity : Enzyme3.4.21.- [ Enzyme-Expasy ]   3.4.21.-3.4.21.- [ IntEnz-EBI ]   3.4.21.- [ BRENDA ]   3.4.21.- [ KEGG ]   
PhosPhoSitePlusQ8NF86
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)    TRYPSIN_SER (PS00135)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS    TRYPSIN_SER   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS33
DMDM Disease mutations260429
Blocks (Seattle)PRSS33
SuperfamilyQ8NF86
Human Protein AtlasENSG00000103355
Peptide AtlasQ8NF86
HPRD07109
IPIIPI00295681   
Protein Interaction databases
DIP (DOE-UCLA)Q8NF86
IntAct (EBI)Q8NF86
FunCoupENSG00000103355
BioGRIDPRSS33
STRING (EMBL)PRSS33
ZODIACPRSS33
Ontologies - Pathways
QuickGOQ8NF86
Ontology : AmiGOserine-type endopeptidase activity  extracellular space  proteolysis  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular space  proteolysis  
NDEx NetworkPRSS33
Atlas of Cancer Signalling NetworkPRSS33
Wikipedia pathwaysPRSS33
Orthology - Evolution
OrthoDB260429
GeneTree (enSembl)ENSG00000103355
Phylogenetic Trees/Animal Genes : TreeFamPRSS33
HOVERGENQ8NF86
HOGENOMQ8NF86
Homologs : HomoloGenePRSS33
Homology/Alignments : Family Browser (UCSC)PRSS33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS33
dbVarPRSS33
ClinVarPRSS33
1000_GenomesPRSS33 
Exome Variant ServerPRSS33
ExAC (Exome Aggregation Consortium)PRSS33 (select the gene name)
Genetic variants : HAPMAP260429
Genomic Variants (DGV)PRSS33 [DGVbeta]
DECIPHERPRSS33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS33 
Mutations
ICGC Data PortalPRSS33 
TCGA Data PortalPRSS33 
Broad Tumor PortalPRSS33
OASIS PortalPRSS33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRSS33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPRSS33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRSS33
DgiDB (Drug Gene Interaction Database)PRSS33
DoCM (Curated mutations)PRSS33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRSS33 (select a term)
intoGenPRSS33
Cancer3DPRSS33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613797   
Orphanet
MedgenPRSS33
Genetic Testing Registry PRSS33
NextProtQ8NF86 [Medical]
TSGene260429
GENETestsPRSS33
Huge Navigator PRSS33 [HugePedia]
snp3D : Map Gene to Disease260429
BioCentury BCIQPRSS33
ClinGenPRSS33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD260429
Chemical/Pharm GKB GenePA134987813
Clinical trialPRSS33
Miscellaneous
canSAR (ICR)PRSS33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRSS33
EVEXPRSS33
GoPubMedPRSS33
iHOPPRSS33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:49:56 CEST 2017

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