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PRSS36 (protease, serine 36)

Identity

Alias_namesprotease, serine, 36
Alias_symbol (synonym)FLJ90661
Other alias-
HGNC (Hugo) PRSS36
LocusID (NCBI) 146547
Atlas_Id 72308
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 31138926 and ends at 31150094 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FUS (16p11.2) / PRSS36 (16p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRSS36   26906
Cards
Entrez_Gene (NCBI)PRSS36  146547  protease, serine 36
Aliases
GeneCards (Weizmann)PRSS36
Ensembl hg19 (Hinxton)ENSG00000178226 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178226 [Gene_View]  chr16:31138926-31150094 [Contig_View]  PRSS36 [Vega]
ICGC DataPortalENSG00000178226
TCGA cBioPortalPRSS36
AceView (NCBI)PRSS36
Genatlas (Paris)PRSS36
WikiGenes146547
SOURCE (Princeton)PRSS36
Genetics Home Reference (NIH)PRSS36
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS36  -     chr16:31138926-31150094 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS36  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblPRSS36 - 16p11.2 [CytoView hg19]  PRSS36 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIPRSS36 [Mapview hg19]  PRSS36 [Mapview hg38]
OMIM610560   
Gene and transcription
Genbank (Entrez)AI864473 AJ627034 AK075142 AK290310 AK297997
RefSeq transcript (Entrez)NM_001258290 NM_001258291 NM_173502
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS36
Cluster EST : UnigeneHs.256632 [ NCBI ]
CGAP (NCI)Hs.256632
Alternative Splicing GalleryENSG00000178226
Gene ExpressionPRSS36 [ NCBI-GEO ]   PRSS36 [ EBI - ARRAY_EXPRESS ]   PRSS36 [ SEEK ]   PRSS36 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146547
GTEX Portal (Tissue expression)PRSS36
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5K4E3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5K4E3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5K4E3
Splice isoforms : SwissVarQ5K4E3
Catalytic activity : Enzyme3.4.21.- [ Enzyme-Expasy ]   3.4.21.-3.4.21.- [ IntEnz-EBI ]   3.4.21.- [ BRENDA ]   3.4.21.- [ KEGG ]   
PhosPhoSitePlusQ5K4E3
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)    TRYPSIN_SER (PS00135)   
Domains : Interpro (EBI)Pept_S1A_polyserase-2    Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS    TRYPSIN_SER   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS36
DMDM Disease mutations146547
Blocks (Seattle)PRSS36
SuperfamilyQ5K4E3
Human Protein AtlasENSG00000178226
Peptide AtlasQ5K4E3
HPRD07119
IPIIPI00168352   IPI00910689   
Protein Interaction databases
DIP (DOE-UCLA)Q5K4E3
IntAct (EBI)Q5K4E3
FunCoupENSG00000178226
BioGRIDPRSS36
STRING (EMBL)PRSS36
ZODIACPRSS36
Ontologies - Pathways
QuickGOQ5K4E3
Ontology : AmiGOserine-type endopeptidase activity  proteinaceous extracellular matrix  cytoplasm  proteolysis  
Ontology : EGO-EBIserine-type endopeptidase activity  proteinaceous extracellular matrix  cytoplasm  proteolysis  
NDEx NetworkPRSS36
Atlas of Cancer Signalling NetworkPRSS36
Wikipedia pathwaysPRSS36
Orthology - Evolution
OrthoDB146547
GeneTree (enSembl)ENSG00000178226
Phylogenetic Trees/Animal Genes : TreeFamPRSS36
HOVERGENQ5K4E3
HOGENOMQ5K4E3
Homologs : HomoloGenePRSS36
Homology/Alignments : Family Browser (UCSC)PRSS36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS36
dbVarPRSS36
ClinVarPRSS36
1000_GenomesPRSS36 
Exome Variant ServerPRSS36
ExAC (Exome Aggregation Consortium)PRSS36 (select the gene name)
Genetic variants : HAPMAP146547
Genomic Variants (DGV)PRSS36 [DGVbeta]
DECIPHERPRSS36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS36 
Mutations
ICGC Data PortalPRSS36 
TCGA Data PortalPRSS36 
Broad Tumor PortalPRSS36
OASIS PortalPRSS36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRSS36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPRSS36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRSS36
DgiDB (Drug Gene Interaction Database)PRSS36
DoCM (Curated mutations)PRSS36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRSS36 (select a term)
intoGenPRSS36
Cancer3DPRSS36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610560   
Orphanet
MedgenPRSS36
Genetic Testing Registry PRSS36
NextProtQ5K4E3 [Medical]
TSGene146547
GENETestsPRSS36
Target ValidationPRSS36
Huge Navigator PRSS36 [HugePedia]
snp3D : Map Gene to Disease146547
BioCentury BCIQPRSS36
ClinGenPRSS36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146547
Chemical/Pharm GKB GenePA142671123
Clinical trialPRSS36
Miscellaneous
canSAR (ICR)PRSS36 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRSS36
EVEXPRSS36
GoPubMedPRSS36
iHOPPRSS36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:37:40 CEST 2017

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