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PRSS37 (protease, serine 37)

Identity

Other aliasTRYX2
HGNC (Hugo) PRSS37
LocusID (NCBI) 136242
Atlas_Id 72309
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 141836278 and ends at 141841421 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRSS37   29211
Cards
Entrez_Gene (NCBI)PRSS37  136242  protease, serine 37
AliasesTRYX2
GeneCards (Weizmann)PRSS37
Ensembl hg19 (Hinxton)ENSG00000165076 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165076 [Gene_View]  chr7:141836278-141841421 [Contig_View]  PRSS37 [Vega]
ICGC DataPortalENSG00000165076
TCGA cBioPortalPRSS37
AceView (NCBI)PRSS37
Genatlas (Paris)PRSS37
WikiGenes136242
SOURCE (Princeton)PRSS37
Genetics Home Reference (NIH)PRSS37
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS37  -     chr7:141836278-141841421 -  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS37  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblPRSS37 - 7q34 [CytoView hg19]  PRSS37 - 7q34 [CytoView hg38]
Mapping of homologs : NCBIPRSS37 [Mapview hg19]  PRSS37 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA628371 AK097648 AK172866 BC137353 BC137354
RefSeq transcript (Entrez)NM_001008270 NM_001171951
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS37
Cluster EST : UnigeneHs.98947 [ NCBI ]
CGAP (NCI)Hs.98947
Alternative Splicing GalleryENSG00000165076
Gene ExpressionPRSS37 [ NCBI-GEO ]   PRSS37 [ EBI - ARRAY_EXPRESS ]   PRSS37 [ SEEK ]   PRSS37 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)136242
GTEX Portal (Tissue expression)PRSS37
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D1T9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D1T9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D1T9
Splice isoforms : SwissVarA4D1T9
PhosPhoSitePlusA4D1T9
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS37
DMDM Disease mutations136242
Blocks (Seattle)PRSS37
SuperfamilyA4D1T9
Human Protein AtlasENSG00000165076
Peptide AtlasA4D1T9
HPRD17297
IPIIPI00555974   IPI00955951   IPI00927751   IPI00927090   
Protein Interaction databases
DIP (DOE-UCLA)A4D1T9
IntAct (EBI)A4D1T9
FunCoupENSG00000165076
BioGRIDPRSS37
STRING (EMBL)PRSS37
ZODIACPRSS37
Ontologies - Pathways
QuickGOA4D1T9
Ontology : AmiGOserine-type endopeptidase activity  extracellular region  nucleus  proteolysis  binding of sperm to zona pellucida  cell migration  protein maturation  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular region  nucleus  proteolysis  binding of sperm to zona pellucida  cell migration  protein maturation  
NDEx NetworkPRSS37
Atlas of Cancer Signalling NetworkPRSS37
Wikipedia pathwaysPRSS37
Orthology - Evolution
OrthoDB136242
GeneTree (enSembl)ENSG00000165076
Phylogenetic Trees/Animal Genes : TreeFamPRSS37
HOVERGENA4D1T9
HOGENOMA4D1T9
Homologs : HomoloGenePRSS37
Homology/Alignments : Family Browser (UCSC)PRSS37
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS37
dbVarPRSS37
ClinVarPRSS37
1000_GenomesPRSS37 
Exome Variant ServerPRSS37
ExAC (Exome Aggregation Consortium)PRSS37 (select the gene name)
Genetic variants : HAPMAP136242
Genomic Variants (DGV)PRSS37 [DGVbeta]
DECIPHERPRSS37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS37 
Mutations
ICGC Data PortalPRSS37 
TCGA Data PortalPRSS37 
Broad Tumor PortalPRSS37
OASIS PortalPRSS37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRSS37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPRSS37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRSS37
DgiDB (Drug Gene Interaction Database)PRSS37
DoCM (Curated mutations)PRSS37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRSS37 (select a term)
intoGenPRSS37
Cancer3DPRSS37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPRSS37
Genetic Testing Registry PRSS37
NextProtA4D1T9 [Medical]
TSGene136242
GENETestsPRSS37
Target ValidationPRSS37
Huge Navigator PRSS37 [HugePedia]
snp3D : Map Gene to Disease136242
BioCentury BCIQPRSS37
ClinGenPRSS37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD136242
Chemical/Pharm GKB GenePA165618277
Clinical trialPRSS37
Miscellaneous
canSAR (ICR)PRSS37 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRSS37
EVEXPRSS37
GoPubMedPRSS37
iHOPPRSS37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:37:40 CEST 2017

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