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PRSS3P2 (PRSS3 pseudogene 2)

Identity

Alias (NCBI)T6
TRY6
HGNC (Hugo) PRSS3P2
HGNC Alias symbTRY6
HGNC Alias nametrypsinogen C
HGNC Previous nameprotease, serine 3 pseudogene 2
LocusID (NCBI) 154754
Atlas_Id 47717
Location 7q34  [Link to chromosome band 7q34]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)PRSS3P2   43788
Cards
Entrez_Gene (NCBI)PRSS3P2    PRSS3 pseudogene 2
AliasesT6; TRY6
GeneCards (Weizmann)PRSS3P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  PRSS3P2 [Vega]
TCGA cBioPortalPRSS3P2
AceView (NCBI)PRSS3P2
Genatlas (Paris)PRSS3P2
SOURCE (Princeton)PRSS3P2
Genetics Home Reference (NIH)PRSS3P2
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS3P2  -  
GoldenPath hg19 (UCSC)PRSS3P2  -  
GoldenPathPRSS3P2 - [CytoView hg19]  PRSS3P2 - [CytoView hg38]
Genome Data Viewer NCBIPRSS3P2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BE047035
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS3P2
Gene ExpressionPRSS3P2 [ NCBI-GEO ]   PRSS3P2 [ EBI - ARRAY_EXPRESS ]   PRSS3P2 [ SEEK ]   PRSS3P2 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS3P2 [ Firebrowse - Broad ]
GenevisibleExpression of PRSS3P2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)154754
GTEX Portal (Tissue expression)PRSS3P2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHM4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHM4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHM4
Catalytic activity : Enzyme3.4.21.4 [ Enzyme-Expasy ]   3.4.21.43.4.21.4 [ IntEnz-EBI ]   3.4.21.4 [ BRENDA ]   3.4.21.4 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ8NHM4
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)    TRYPSIN_SER (PS00135)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1_PA_chymotrypsin    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS    TRYPSIN_SER   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS3P2
SuperfamilyQ8NHM4
AlphaFold pdb e-kbQ8NHM4   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHM4
IntAct (EBI)Q8NHM4
BioGRIDPRSS3P2
STRING (EMBL)PRSS3P2
ZODIACPRSS3P2
Ontologies - Pathways
QuickGOQ8NHM4
Ontology : AmiGOserine-type endopeptidase activity  extracellular space  proteolysis  endothelial cell migration  metal ion binding  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular space  proteolysis  endothelial cell migration  metal ion binding  
NDEx NetworkPRSS3P2
Atlas of Cancer Signalling NetworkPRSS3P2
Wikipedia pathwaysPRSS3P2
Orthology - Evolution
OrthoDB154754
Phylogenetic Trees/Animal Genes : TreeFamPRSS3P2
Homologs : HomoloGenePRSS3P2
Homology/Alignments : Family Browser (UCSC)PRSS3P2
Gene fusions - Rearrangements
Fusion : QuiverPRSS3P2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS3P2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS3P2
dbVarPRSS3P2
ClinVarPRSS3P2
MonarchPRSS3P2
1000_GenomesPRSS3P2 
Exome Variant ServerPRSS3P2
Varsome BrowserPRSS3P2
ACMGPRSS3P2 variants
VarityQ8NHM4
Genomic Variants (DGV)PRSS3P2 [DGVbeta]
DECIPHERPRSS3P2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS3P2 
Mutations
ICGC Data PortalPRSS3P2 
TCGA Data PortalPRSS3P2 
Broad Tumor PortalPRSS3P2
OASIS PortalPRSS3P2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPRSS3P2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPRSS3P2
DgiDB (Drug Gene Interaction Database)PRSS3P2
DoCM (Curated mutations)PRSS3P2
CIViC (Clinical Interpretations of Variants in Cancer)PRSS3P2
Cancer3DPRSS3P2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPRSS3P2
MedgenPRSS3P2
Genetic Testing Registry PRSS3P2
NextProtQ8NHM4 [Medical]
GENETestsPRSS3P2
Target ValidationPRSS3P2
Huge Navigator PRSS3P2 [HugePedia]
ClinGenPRSS3P2
Clinical trials, drugs, therapy
MyCancerGenomePRSS3P2
Protein Interactions : CTDPRSS3P2
PharosQ8NHM4
Clinical trialPRSS3P2
Miscellaneous
canSAR (ICR)PRSS3P2
HarmonizomePRSS3P2
DataMed IndexPRSS3P2
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRSS3P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:27:06 CEST 2021

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