Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PRSS41 (serine protease 41)

Identity

Alias (NCBI)TESSP1
HGNC (Hugo) PRSS41
HGNC Alias symbTESSP1
HGNC Alias nametestis serine protease 1
HGNC Previous nameprotease, serine 41
LocusID (NCBI) 360226
Atlas_Id 50722
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2798470 and ends at 2805304 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PRSS41   30715
Cards
Entrez_Gene (NCBI)PRSS41    serine protease 41
AliasesTESSP1
GeneCards (Weizmann)PRSS41
Ensembl hg19 (Hinxton)ENSG00000215148 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215148 [Gene_View]  ENSG00000215148 [Sequence]  chr16:2798470-2805304 [Contig_View]  PRSS41 [Vega]
ICGC DataPortalENSG00000215148
TCGA cBioPortalPRSS41
AceView (NCBI)PRSS41
Genatlas (Paris)PRSS41
SOURCE (Princeton)PRSS41
Genetics Home Reference (NIH)PRSS41
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS41  -     chr16:2798470-2805304 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS41  -     16p13.3   [Description]    (hg19-Feb_2009)
GoldenPathPRSS41 - 16p13.3 [CytoView hg19]  PRSS41 - 16p13.3 [CytoView hg38]
ImmunoBaseENSG00000215148
Genome Data Viewer NCBIPRSS41 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BN000124
RefSeq transcript (Entrez)NM_001135086 NM_001354586
Consensus coding sequences : CCDS (NCBI)PRSS41
Gene ExpressionPRSS41 [ NCBI-GEO ]   PRSS41 [ EBI - ARRAY_EXPRESS ]   PRSS41 [ SEEK ]   PRSS41 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS41 [ Firebrowse - Broad ]
GenevisibleExpression of PRSS41 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)360226
GTEX Portal (Tissue expression)PRSS41
Human Protein AtlasENSG00000215148-PRSS41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7RTY9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7RTY9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7RTY9
Catalytic activity : Enzyme3.4.21.- [ Enzyme-Expasy ]   3.4.21.-3.4.21.- [ IntEnz-EBI ]   3.4.21.- [ BRENDA ]   3.4.21.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ7RTY9
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)    TRYPSIN_SER (PS00135)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1_PA_chymotrypsin    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS    TRYPSIN_SER   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS41
SuperfamilyQ7RTY9
AlphaFold pdb e-kbQ7RTY9   
Human Protein Atlas [tissue]ENSG00000215148-PRSS41 [tissue]
HPRD15488
Protein Interaction databases
DIP (DOE-UCLA)Q7RTY9
IntAct (EBI)Q7RTY9
BioGRIDPRSS41
STRING (EMBL)PRSS41
ZODIACPRSS41
Ontologies - Pathways
QuickGOQ7RTY9
Ontology : AmiGOserine-type endopeptidase activity  extracellular region  plasma membrane  plasma membrane  proteolysis  sodium channel regulator activity  anchored component of membrane  intracellular organelle  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular region  plasma membrane  plasma membrane  proteolysis  sodium channel regulator activity  anchored component of membrane  intracellular organelle  
NDEx NetworkPRSS41
Atlas of Cancer Signalling NetworkPRSS41
Wikipedia pathwaysPRSS41
Orthology - Evolution
OrthoDB360226
GeneTree (enSembl)ENSG00000215148
Phylogenetic Trees/Animal Genes : TreeFamPRSS41
Homologs : HomoloGenePRSS41
Homology/Alignments : Family Browser (UCSC)PRSS41
Gene fusions - Rearrangements
Fusion : QuiverPRSS41
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS41
dbVarPRSS41
ClinVarPRSS41
MonarchPRSS41
1000_GenomesPRSS41 
Exome Variant ServerPRSS41
GNOMAD BrowserENSG00000215148
Varsome BrowserPRSS41
ACMGPRSS41 variants
VarityQ7RTY9
Genomic Variants (DGV)PRSS41 [DGVbeta]
DECIPHERPRSS41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS41 
Mutations
ICGC Data PortalPRSS41 
TCGA Data PortalPRSS41 
Broad Tumor PortalPRSS41
OASIS PortalPRSS41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRSS41  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPRSS41
Mutations and Diseases : HGMDPRSS41
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPRSS41
DgiDB (Drug Gene Interaction Database)PRSS41
DoCM (Curated mutations)PRSS41
CIViC (Clinical Interpretations of Variants in Cancer)PRSS41
Cancer3DPRSS41
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPRSS41
MedgenPRSS41
Genetic Testing Registry PRSS41
NextProtQ7RTY9 [Medical]
GENETestsPRSS41
Target ValidationPRSS41
Huge Navigator PRSS41 [HugePedia]
ClinGenPRSS41
Clinical trials, drugs, therapy
MyCancerGenomePRSS41
Protein Interactions : CTDPRSS41
Pharm GKB GenePA165450634
PharosQ7RTY9
Clinical trialPRSS41
Miscellaneous
canSAR (ICR)PRSS41
HarmonizomePRSS41
DataMed IndexPRSS41
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPRSS41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:27:06 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.