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PRSS45 (protease, serine 45)

Identity

Alias_symbol (synonym)TESSP5
Other alias
HGNC (Hugo) PRSS45
LocusID (NCBI) 377047
Atlas_Id 72312
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 46742091 and ends at 46744755 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PRSS45   30717
Cards
Entrez_Gene (NCBI)PRSS45  377047  protease, serine 45
AliasesTESSP5
GeneCards (Weizmann)PRSS45
Ensembl hg19 (Hinxton)ENSG00000188086 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188086 [Gene_View]  chr3:46742091-46744755 [Contig_View]  PRSS45 [Vega]
ICGC DataPortalENSG00000188086
TCGA cBioPortalPRSS45
AceView (NCBI)PRSS45
Genatlas (Paris)PRSS45
WikiGenes377047
SOURCE (Princeton)PRSS45
Genetics Home Reference (NIH)PRSS45
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS45  -     chr3:46742091-46744755 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS45  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblPRSS45 - 3p21.31 [CytoView hg19]  PRSS45 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIPRSS45 [Mapview hg19]  PRSS45 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW137088 BC133695 BN000137
RefSeq transcript (Entrez)NM_199183
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS45
Cluster EST : UnigeneHs.667712 [ NCBI ]
CGAP (NCI)Hs.667712
Alternative Splicing GalleryENSG00000188086
Gene ExpressionPRSS45 [ NCBI-GEO ]   PRSS45 [ EBI - ARRAY_EXPRESS ]   PRSS45 [ SEEK ]   PRSS45 [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS45 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)377047
GTEX Portal (Tissue expression)PRSS45
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7RTY3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7RTY3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7RTY3
Splice isoforms : SwissVarQ7RTY3
Catalytic activity : Enzyme3.4.21.- [ Enzyme-Expasy ]   3.4.21.-3.4.21.- [ IntEnz-EBI ]   3.4.21.- [ BRENDA ]   3.4.21.- [ KEGG ]   
PhosPhoSitePlusQ7RTY3
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)PRSS45
DMDM Disease mutations377047
Blocks (Seattle)PRSS45
SuperfamilyQ7RTY3
Human Protein AtlasENSG00000188086
Peptide AtlasQ7RTY3
HPRD07157
IPIIPI00902659   IPI00396122   IPI00443694   IPI00974514   
Protein Interaction databases
DIP (DOE-UCLA)Q7RTY3
IntAct (EBI)Q7RTY3
FunCoupENSG00000188086
BioGRIDPRSS45
STRING (EMBL)PRSS45
ZODIACPRSS45
Ontologies - Pathways
QuickGOQ7RTY3
Ontology : AmiGOserine-type endopeptidase activity  proteolysis  
Ontology : EGO-EBIserine-type endopeptidase activity  proteolysis  
NDEx NetworkPRSS45
Atlas of Cancer Signalling NetworkPRSS45
Wikipedia pathwaysPRSS45
Orthology - Evolution
OrthoDB377047
GeneTree (enSembl)ENSG00000188086
Phylogenetic Trees/Animal Genes : TreeFamPRSS45
HOVERGENQ7RTY3
HOGENOMQ7RTY3
Homologs : HomoloGenePRSS45
Homology/Alignments : Family Browser (UCSC)PRSS45
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPRSS45 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PRSS45
dbVarPRSS45
ClinVarPRSS45
1000_GenomesPRSS45 
Exome Variant ServerPRSS45
ExAC (Exome Aggregation Consortium)PRSS45 (select the gene name)
Genetic variants : HAPMAP377047
Genomic Variants (DGV)PRSS45 [DGVbeta]
DECIPHERPRSS45 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPRSS45 
Mutations
ICGC Data PortalPRSS45 
TCGA Data PortalPRSS45 
Broad Tumor PortalPRSS45
OASIS PortalPRSS45 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPRSS45  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPRSS45
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PRSS45
DgiDB (Drug Gene Interaction Database)PRSS45
DoCM (Curated mutations)PRSS45 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PRSS45 (select a term)
intoGenPRSS45
Cancer3DPRSS45(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPRSS45
Genetic Testing Registry PRSS45
NextProtQ7RTY3 [Medical]
TSGene377047
GENETestsPRSS45
Target ValidationPRSS45
Huge Navigator PRSS45 [HugePedia]
snp3D : Map Gene to Disease377047
BioCentury BCIQPRSS45
ClinGenPRSS45
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD377047
Chemical/Pharm GKB GenePA165698329
Clinical trialPRSS45
Miscellaneous
canSAR (ICR)PRSS45 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRSS45
EVEXPRSS45
GoPubMedPRSS45
iHOPPRSS45
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:37:41 CEST 2017

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