Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PSG8-AS1 (PSG8 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PSG8-AS1
LocusID (NCBI) 100289650
Atlas_Id 79097
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 42821863 and ends at 42826878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PSG8-AS1   52550
Cards
Entrez_Gene (NCBI)PSG8-AS1  100289650  PSG8 antisense RNA 1
Aliases
GeneCards (Weizmann)PSG8-AS1
Ensembl hg19 (Hinxton)ENSG00000225877 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225877 [Gene_View]  chr19:42821863-42826878 [Contig_View]  PSG8-AS1 [Vega]
ICGC DataPortalENSG00000225877
TCGA cBioPortalPSG8-AS1
AceView (NCBI)PSG8-AS1
Genatlas (Paris)PSG8-AS1
WikiGenes100289650
SOURCE (Princeton)PSG8-AS1
Genetics Home Reference (NIH)PSG8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PSG8-AS1  -     chr19:42821863-42826878 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PSG8-AS1  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblPSG8-AS1 - 19q13.2 [CytoView hg19]  PSG8-AS1 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIPSG8-AS1 [Mapview hg19]  PSG8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054869
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PSG8-AS1
Cluster EST : UnigeneHs.680622 [ NCBI ]
CGAP (NCI)Hs.680622
Alternative Splicing GalleryENSG00000225877
Gene ExpressionPSG8-AS1 [ NCBI-GEO ]   PSG8-AS1 [ EBI - ARRAY_EXPRESS ]   PSG8-AS1 [ SEEK ]   PSG8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PSG8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289650
GTEX Portal (Tissue expression)PSG8-AS1
Human Protein AtlasENSG00000225877-PSG8-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PSG8-AS1
DMDM Disease mutations100289650
Blocks (Seattle)PSG8-AS1
Human Protein Atlas [tissue]ENSG00000225877-PSG8-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000225877
BioGRIDPSG8-AS1
STRING (EMBL)PSG8-AS1
ZODIACPSG8-AS1
Ontologies - Pathways
Huge Navigator PSG8-AS1 [HugePedia]
snp3D : Map Gene to Disease100289650
BioCentury BCIQPSG8-AS1
ClinGenPSG8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289650
Clinical trialPSG8-AS1
Miscellaneous
canSAR (ICR)PSG8-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePSG8-AS1
EVEXPSG8-AS1
GoPubMedPSG8-AS1
iHOPPSG8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:39:43 CET 2017

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