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PSMB8-AS1 (PSMB8 antisense RNA 1 (head to head))

Identity

Alias_namesTAPSAR1
TAP1 and PSMB8 antisense RNA 1
Alias_symbol (synonym)XXbac-BPG246D15.8
TAP1-AS1
Other alias
HGNC (Hugo) PSMB8-AS1
LocusID (NCBI) 100507463
Atlas_Id 72343
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32844086 and ends at 32846500 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PSMB8-AS1   39758
Cards
Entrez_Gene (NCBI)PSMB8-AS1  100507463  PSMB8 antisense RNA 1 (head to head)
AliasesTAP1-AS1; TAPSAR1
GeneCards (Weizmann)PSMB8-AS1
Ensembl hg19 (Hinxton)ENSG00000204261 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204261 [Gene_View]  ENSG00000204261 [Sequence]  chr6:32844086-32846500 [Contig_View]  PSMB8-AS1 [Vega]
ICGC DataPortalENSG00000204261
TCGA cBioPortalPSMB8-AS1
AceView (NCBI)PSMB8-AS1
Genatlas (Paris)PSMB8-AS1
WikiGenes100507463
SOURCE (Princeton)PSMB8-AS1
Genetics Home Reference (NIH)PSMB8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PSMB8-AS1  -     chr6:32844086-32846500 +  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PSMB8-AS1  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblPSMB8-AS1 - 6p21.32 [CytoView hg19]  PSMB8-AS1 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIPSMB8-AS1 [Mapview hg19]  PSMB8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI906764 BU539272 CK904130 CR977230
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_011759 NG_028165 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)PSMB8-AS1
Cluster EST : UnigeneHs.731555 [ NCBI ]
CGAP (NCI)Hs.731555
Alternative Splicing GalleryENSG00000204261
Gene ExpressionPSMB8-AS1 [ NCBI-GEO ]   PSMB8-AS1 [ EBI - ARRAY_EXPRESS ]   PSMB8-AS1 [ SEEK ]   PSMB8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PSMB8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507463
GTEX Portal (Tissue expression)PSMB8-AS1
Human Protein AtlasENSG00000204261-PSMB8-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PSMB8-AS1
DMDM Disease mutations100507463
Blocks (Seattle)PSMB8-AS1
Human Protein Atlas [tissue]ENSG00000204261-PSMB8-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000204261
BioGRIDPSMB8-AS1
STRING (EMBL)PSMB8-AS1
ZODIACPSMB8-AS1
Ontologies - Pathways
Huge Navigator PSMB8-AS1 [HugePedia]
snp3D : Map Gene to Disease100507463
BioCentury BCIQPSMB8-AS1
ClinGenPSMB8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507463
Clinical trialPSMB8-AS1
Miscellaneous
canSAR (ICR)PSMB8-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePSMB8-AS1
EVEXPSMB8-AS1
GoPubMedPSMB8-AS1
iHOPPSMB8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:25:32 CEST 2018

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