| Nomenclature | | HGNC (Hugo) | PSMD9 9567 |
| Entrez_Gene (NCBI) | PSMD9 5715 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 |
| Cards | | GeneCards (Weizmann) | PSMD9 |
| Ensembl (Hinxton) | ENSG00000110801 [Gene_View] chr12:122326637-122355771 [Contig_View] PSMD9 [Vega] |
| AceView (NCBI) | PSMD9 |
| Genatlas (Paris) | PSMD9 |
| SOURCE (Stanford) | NM_001261400 NM_002813 |
| Genomic and cartography | | GoldenPath (UCSC) | PSMD9 - 12q24.31 chr12:122326637-122355771 + 12q24.31 [Description] (hg19-Feb_2009) |
| Ensembl | PSMD9 - 12q24.31 [CytoView] |
| Mapping of homologs : NCBI | PSMD9 [Mapview] |
| OMIM | 603146 |
| Gene and transcription |
| Genbank (Entrez) | AK055339 AK315389 BC002383 BC004184 BC004213 |
| RefSeq transcript (SRS) | NM_001261400 NM_002813 |
| RefSeq transcript (Entrez) | NM_001261400 NM_002813 |
| RefSeq genomic (SRS) | AC_000144 NC_000012 NC_018923 NT_009775 NW_001838063 NW_004078075 |
| RefSeq genomic (Entrez) | AC_000144 NC_000012 NC_018923 NT_009775 NW_001838063 NW_004078075 |
| Consensus coding sequences : CCDS (NCBI) | PSMD9 |
| Cluster EST : Unigene | Hs.131151 [ SRS ] Hs.131151 [ NCBI ] |
| CGAP (NCI) | Hs.131151 |
| Alternative Splicing : Fast-db (Paris) | GSHG0007077 |
| Alternative Splicing Gallery | ENSG00000110801 |
| Gene Expression | PSMD9 [ NCBI-GEO ] PSMD9 [ EBI - ARRAY_EXPRESS ] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | O00233 (SRS) O00233 (Uniprot) |
| NextProt | O00233 |
| With graphics : InterPro | O00233 |
| Splice isoforms : SwissVar | O00233(Swissvar) |
| Domaine pattern : Prosite (SRS) | PDZ (PS50106) |
| Domaine pattern : Prosite (Expaxy) | PDZ (PS50106) |
| Domains : Interpro (SRS) | PDZ |
| Domains : Interpro (EBI) | PDZ |
| Related proteins : CluSTr | O00233 |
| Domain families : Pfam (SRS) | PDZ_2 (PF13180) |
| Domain families : Pfam (Sanger) | PDZ_2 (PF13180) |
| Domain families : Pfam (NCBI) | pfam13180 |
| Domain families : Smart (EMBL) | PDZ (SM00228) |
| DMDM | 5715 |
| Blocks (Seattle) | O00233 |
| Human Protein Atlas | ENSG00000110801 |
| HPRD | 04394 |
| IPI | IPI00010860 IPI00216220 IPI00791380 IPI01014410 IPI01014017 IPI01013622 IPI01013452 IPI01013039 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | O00233 |
| IntAct (EBI) | O00233 |
| FunCoup | ENSG00000110801 |
| REACTOME | PSMD9 |
| Protein Interaction Database | 5715 |
| BioGRID | PSMD9 |
| InParanoid | O00233 |
| Interologous Interaction database | O00233 |
| IntegromeDB | PSMD9 |
| Polymorphism : SNP, mutations, diseases | | SNP Single Nucleotide Polymorphism (NCBI) | PSMD9 |
| SNP (GeneSNP Utah) | PSMD9 |
| SNP : HGBase | PSMD9 |
| Genetic variants : HAPMAP | PSMD9 |
| Somatic Mutations in Cancer : COSMIC | PSMD9 |
| CONAN: Copy Number Analysis | PSMD9 |
| Mutations and Diseases : HGMD | PSMD9 |
| OMIM | 603146 |
| GENETests | 603146 |
| Disease Genetic Association | PSMD9 |
| Huge Navigator |
PSMD9 [HugePedia] PSMD9 [HugeCancerGEM] |
| Genomic Variants | PSMD9 PSMD9 [DGVbeta] |
| snp3D : Map Gene to Disease | 5715 |
| General knowledge |
|---|
| Homologs : HomoloGene | PSMD9 |
| Homology/Alignments : Family Browser (UCSC) | PSMD9 |
| Phylogenetic Trees/Animal Genes : TreeFam | PSMD9 |
| Chemical/Protein Interactions : CTD | 5715 |
| Chemical/Pharm GKB Gene | PA33913 |
| Clinical trial | PSMD9 |
| Cancer Resource (Charite) | ENSG00000110801 |
| Ontology : AmiGO | cell cycle checkpoint G1/S transition of mitotic cell cycle S phase of mitotic cell cycle protein polyubiquitination M/G1 transition of mitotic cell cycle mitotic cell cycle antigen processing and presentation of peptide antigen via MHC class I antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent transcription coactivator activity protein binding nucleus nucleoplasm cytosol proteasome regulatory particle ubiquitin-dependent protein catabolic process regulation of cellular amino acid metabolic process apoptotic process DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest proteasome regulatory particle, base subcomplex gene expression viral reproduction RNA metabolic process mRNA metabolic process anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process positive regulation of insulin secretion cellular nitrogen compound metabolic process antigen processing and presentation of exogenous peptide antigen via MHC class I regulation of apoptotic process bHLH transcription factor binding small molecule metabolic process positive regulation of transcription, DNA-dependent negative regulation of insulin secretion negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle proteasome regulatory particle assembly |
| Ontology : EGO-EBI | cell cycle checkpoint G1/S transition of mitotic cell cycle S phase of mitotic cell cycle protein polyubiquitination M/G1 transition of mitotic cell cycle mitotic cell cycle antigen processing and presentation of peptide antigen via MHC class I antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent transcription coactivator activity protein binding nucleus nucleoplasm cytosol proteasome regulatory particle ubiquitin-dependent protein catabolic process regulation of cellular amino acid metabolic process apoptotic process DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest proteasome regulatory particle, base subcomplex gene expression viral reproduction RNA metabolic process mRNA metabolic process anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process positive regulation of insulin secretion cellular nitrogen compound metabolic process antigen processing and presentation of exogenous peptide antigen via MHC class I regulation of apoptotic process bHLH transcription factor binding small molecule metabolic process positive regulation of transcription, DNA-dependent negative regulation of insulin secretion negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle proteasome regulatory particle assembly |
| Other databases |
| Probes |
|---|
| Litterature | | PubMed | 79 Pubmed reference(s) in Entrez |
| PubGene | PSMD9 |
| iHOP | PSMD9 |
