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PSMG3-AS1 (PSMG3 antisense RNA 1 (head to head))

Identity

Alias_symbol (synonym)KIAA1908
Other alias-
HGNC (Hugo) PSMG3-AS1
LocusID (NCBI) 114796
Atlas_Id 72357
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 1570073 and ends at 1589625 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PSMG3-AS1   22230
Cards
Entrez_Gene (NCBI)PSMG3-AS1  114796  PSMG3 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)PSMG3-AS1
Ensembl hg19 (Hinxton)ENSG00000230487 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230487 [Gene_View]  chr7:1570073-1589625 [Contig_View]  PSMG3-AS1 [Vega]
ICGC DataPortalENSG00000230487
TCGA cBioPortalPSMG3-AS1
AceView (NCBI)PSMG3-AS1
Genatlas (Paris)PSMG3-AS1
WikiGenes114796
SOURCE (Princeton)PSMG3-AS1
Genetics Home Reference (NIH)PSMG3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)PSMG3-AS1  -     chr7:1570073-1589625 +  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PSMG3-AS1  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblPSMG3-AS1 - 7p22.3 [CytoView hg19]  PSMG3-AS1 - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBIPSMG3-AS1 [Mapview hg19]  PSMG3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB067495 AK054665 AK091044 AK092212 BC036405
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PSMG3-AS1
Cluster EST : UnigeneHs.436146 [ NCBI ]
CGAP (NCI)Hs.436146
Alternative Splicing GalleryENSG00000230487
Gene ExpressionPSMG3-AS1 [ NCBI-GEO ]   PSMG3-AS1 [ EBI - ARRAY_EXPRESS ]   PSMG3-AS1 [ SEEK ]   PSMG3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PSMG3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114796
GTEX Portal (Tissue expression)PSMG3-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PY0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PY0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PY0
Splice isoforms : SwissVarQ96PY0
PhosPhoSitePlusQ96PY0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PSMG3-AS1
DMDM Disease mutations114796
Blocks (Seattle)PSMG3-AS1
SuperfamilyQ96PY0
Human Protein AtlasENSG00000230487
Peptide AtlasQ96PY0
IPIIPI00746985   
Protein Interaction databases
DIP (DOE-UCLA)Q96PY0
IntAct (EBI)Q96PY0
FunCoupENSG00000230487
BioGRIDPSMG3-AS1
STRING (EMBL)PSMG3-AS1
ZODIACPSMG3-AS1
Ontologies - Pathways
QuickGOQ96PY0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPSMG3-AS1
Atlas of Cancer Signalling NetworkPSMG3-AS1
Wikipedia pathwaysPSMG3-AS1
Orthology - Evolution
OrthoDB114796
GeneTree (enSembl)ENSG00000230487
Phylogenetic Trees/Animal Genes : TreeFamPSMG3-AS1
HOVERGENQ96PY0
HOGENOMQ96PY0
Homologs : HomoloGenePSMG3-AS1
Homology/Alignments : Family Browser (UCSC)PSMG3-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPSMG3-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PSMG3-AS1
dbVarPSMG3-AS1
ClinVarPSMG3-AS1
1000_GenomesPSMG3-AS1 
Exome Variant ServerPSMG3-AS1
ExAC (Exome Aggregation Consortium)PSMG3-AS1 (select the gene name)
Genetic variants : HAPMAP114796
Genomic Variants (DGV)PSMG3-AS1 [DGVbeta]
DECIPHERPSMG3-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPSMG3-AS1 
Mutations
ICGC Data PortalPSMG3-AS1 
TCGA Data PortalPSMG3-AS1 
Broad Tumor PortalPSMG3-AS1
OASIS PortalPSMG3-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPSMG3-AS1
BioMutasearch PSMG3-AS1
DgiDB (Drug Gene Interaction Database)PSMG3-AS1
DoCM (Curated mutations)PSMG3-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PSMG3-AS1 (select a term)
intoGenPSMG3-AS1
Cancer3DPSMG3-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPSMG3-AS1
Genetic Testing Registry PSMG3-AS1
NextProtQ96PY0 [Medical]
TSGene114796
GENETestsPSMG3-AS1
Target ValidationPSMG3-AS1
Huge Navigator PSMG3-AS1 [HugePedia]
snp3D : Map Gene to Disease114796
BioCentury BCIQPSMG3-AS1
ClinGenPSMG3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114796
Clinical trialPSMG3-AS1
Miscellaneous
canSAR (ICR)PSMG3-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePSMG3-AS1
EVEXPSMG3-AS1
GoPubMedPSMG3-AS1
iHOPPSMG3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:35:34 CEST 2017

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