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PSMG3 (proteasome (prosome, macropain) assembly chaperone 3)

Identity

Alias_namesC7orf48
chromosome 7 open reading frame 48
proteasome (prosome, macropain) assembly chaperone 3
Alias_symbol (synonym)MGC10911
PAC3
Other alias
HGNC (Hugo) PSMG3
LocusID (NCBI) 84262
Atlas_Id 72356
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 1606970 and ends at 1609668 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PSMG3 (7p22.3) / AMACR (5p13.2)PSMG3 (7p22.3) / TRIM55 (8q13.1)TRIM55 (8q13.1) / PSMG3 (7p22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PSMG3   22420
Cards
Entrez_Gene (NCBI)PSMG3  84262  proteasome (prosome, macropain) assembly chaperone 3
AliasesC7orf48; PAC3
GeneCards (Weizmann)PSMG3
Ensembl hg19 (Hinxton)ENSG00000157778 [Gene_View]  chr7:1606970-1609668 [Contig_View]  PSMG3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000157778 [Gene_View]  chr7:1606970-1609668 [Contig_View]  PSMG3 [Vega]
ICGC DataPortalENSG00000157778
TCGA cBioPortalPSMG3
AceView (NCBI)PSMG3
Genatlas (Paris)PSMG3
WikiGenes84262
SOURCE (Princeton)PSMG3
Genetics Home Reference (NIH)PSMG3
Genomic and cartography
GoldenPath hg19 (UCSC)PSMG3  -     chr7:1606970-1609668 -  7p22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PSMG3  -     7p22.3   [Description]    (hg38-Dec_2013)
EnsemblPSMG3 - 7p22.3 [CytoView hg19]  PSMG3 - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBIPSMG3 [Mapview hg19]  PSMG3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC004308 BC027171 BM825255 BR000337 CN261807
RefSeq transcript (Entrez)NM_001134340 NM_032302
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)PSMG3
Cluster EST : UnigeneHs.446311 [ NCBI ]
CGAP (NCI)Hs.446311
Alternative Splicing GalleryENSG00000157778
Gene ExpressionPSMG3 [ NCBI-GEO ]   PSMG3 [ EBI - ARRAY_EXPRESS ]   PSMG3 [ SEEK ]   PSMG3 [ MEM ]
Gene Expression Viewer (FireBrowse)PSMG3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84262
GTEX Portal (Tissue expression)PSMG3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BT73   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BT73  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BT73
Splice isoforms : SwissVarQ9BT73
PhosPhoSitePlusQ9BT73
Domains : Interpro (EBI)Proteasome_assmbl_chp_3   
Domain families : Pfam (Sanger)DUF2372 (PF10178)   
Domain families : Pfam (NCBI)pfam10178   
Conserved Domain (NCBI)PSMG3
DMDM Disease mutations84262
Blocks (Seattle)PSMG3
PDB (SRS)2Z5E   
PDB (PDBSum)2Z5E   
PDB (IMB)2Z5E   
PDB (RSDB)2Z5E   
Structural Biology KnowledgeBase2Z5E   
SCOP (Structural Classification of Proteins)2Z5E   
CATH (Classification of proteins structures)2Z5E   
SuperfamilyQ9BT73
Human Protein AtlasENSG00000157778
Peptide AtlasQ9BT73
HPRD14404
IPIIPI00031106   
Protein Interaction databases
DIP (DOE-UCLA)Q9BT73
IntAct (EBI)Q9BT73
FunCoupENSG00000157778
BioGRIDPSMG3
STRING (EMBL)PSMG3
ZODIACPSMG3
Ontologies - Pathways
QuickGOQ9BT73
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPSMG3
Atlas of Cancer Signalling NetworkPSMG3
Wikipedia pathwaysPSMG3
Orthology - Evolution
OrthoDB84262
GeneTree (enSembl)ENSG00000157778
Phylogenetic Trees/Animal Genes : TreeFamPSMG3
HOVERGENQ9BT73
HOGENOMQ9BT73
Homologs : HomoloGenePSMG3
Homology/Alignments : Family Browser (UCSC)PSMG3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPSMG3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PSMG3
dbVarPSMG3
ClinVarPSMG3
1000_GenomesPSMG3 
Exome Variant ServerPSMG3
ExAC (Exome Aggregation Consortium)PSMG3 (select the gene name)
Genetic variants : HAPMAP84262
Genomic Variants (DGV)PSMG3 [DGVbeta]
DECIPHER (Syndromes)7:1606970-1609668  ENSG00000157778
CONAN: Copy Number AnalysisPSMG3 
Mutations
ICGC Data PortalPSMG3 
TCGA Data PortalPSMG3 
Broad Tumor PortalPSMG3
OASIS PortalPSMG3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPSMG3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPSMG3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PSMG3
DgiDB (Drug Gene Interaction Database)PSMG3
DoCM (Curated mutations)PSMG3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PSMG3 (select a term)
intoGenPSMG3
Cancer3DPSMG3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPSMG3
Genetic Testing Registry PSMG3
NextProtQ9BT73 [Medical]
TSGene84262
GENETestsPSMG3
Huge Navigator PSMG3 [HugePedia]
snp3D : Map Gene to Disease84262
BioCentury BCIQPSMG3
ClinGenPSMG3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84262
Chemical/Pharm GKB GenePA162400247
Clinical trialPSMG3
Miscellaneous
canSAR (ICR)PSMG3 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePSMG3
EVEXPSMG3
GoPubMedPSMG3
iHOPPSMG3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:40:06 CET 2017

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