Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PTCSC1 (papillary thyroid carcinoma susceptibility candidate 1 (non-protein coding))

Identity

Alias_namesPTCSC
papillary thyroid carcinoma susceptibility candidate (non-protein coding)
Alias_symbol (synonym)AK023948
NCRNA00197
Other alias
HGNC (Hugo) PTCSC1
LocusID (NCBI) 100302522
Atlas_Id 51023
Location 8q24.22  [Link to chromosome band 8q24]
Location_base_pair Starts at 134067204 and ends at 134070012 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PTCSC1   37127
Cards
Entrez_Gene (NCBI)PTCSC1  100302522  papillary thyroid carcinoma susceptibility candidate 1 (non-protein coding)
AliasesNCRNA00197; PTCSC
GeneCards (Weizmann)PTCSC1
Ensembl hg19 (Hinxton) [Gene_View]  chr8:134067204-134070012 [Contig_View]  PTCSC1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:134067204-134070012 [Contig_View]  PTCSC1 [Vega]
TCGA cBioPortalPTCSC1
AceView (NCBI)PTCSC1
Genatlas (Paris)PTCSC1
WikiGenes100302522
SOURCE (Princeton)PTCSC1
Genetics Home Reference (NIH)PTCSC1
Genomic and cartography
GoldenPath hg19 (UCSC)PTCSC1  -     chr8:134067204-134070012 +  8q24.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PTCSC1  -     8q24.22   [Description]    (hg38-Dec_2013)
EnsemblPTCSC1 - 8q24.22 [CytoView hg19]  PTCSC1 - 8q24.22 [CytoView hg38]
Mapping of homologs : NCBIPTCSC1 [Mapview hg19]  PTCSC1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023948
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PTCSC1
Cluster EST : UnigeneHs.658759 [ NCBI ]
CGAP (NCI)Hs.658759
Gene ExpressionPTCSC1 [ NCBI-GEO ]   PTCSC1 [ EBI - ARRAY_EXPRESS ]   PTCSC1 [ SEEK ]   PTCSC1 [ MEM ]
Gene Expression Viewer (FireBrowse)PTCSC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302522
GTEX Portal (Tissue expression)PTCSC1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTCSC1
DMDM Disease mutations100302522
Blocks (Seattle)PTCSC1
IPIIPI00748924   
Protein Interaction databases
BioGRIDPTCSC1
STRING (EMBL)PTCSC1
ZODIACPTCSC1
Ontologies - Pathways
Huge Navigator PTCSC1 [HugePedia]
snp3D : Map Gene to Disease100302522
BioCentury BCIQPTCSC1
ClinGenPTCSC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302522
Chemical/Pharm GKB GenePA165585999
Clinical trialPTCSC1
Miscellaneous
canSAR (ICR)PTCSC1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTCSC1
EVEXPTCSC1
GoPubMedPTCSC1
iHOPPTCSC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:16:07 CEST 2017

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