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PTENP1-AS (PTENP1 antisense RNA)

Identity

Alias_symbol (synonym)PTENpg1-asRNA
Other aliasPTENP1as
HGNC (Hugo) PTENP1-AS
LocusID (NCBI) 101243555
Atlas_Id 72374
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 33677268 and ends at 33688010 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PTENP1-AS   48773
Cards
Entrez_Gene (NCBI)PTENP1-AS  101243555  PTENP1 antisense RNA
AliasesPTENP1as; PTENpg1-asRNA
GeneCards (Weizmann)PTENP1-AS
Ensembl hg19 (Hinxton)ENSG00000281128 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281128 [Gene_View]  chr9:33677268-33688010 [Contig_View]  PTENP1-AS [Vega]
ICGC DataPortalENSG00000281128
TCGA cBioPortalPTENP1-AS
AceView (NCBI)PTENP1-AS
Genatlas (Paris)PTENP1-AS
WikiGenes101243555
SOURCE (Princeton)PTENP1-AS
Genetics Home Reference (NIH)PTENP1-AS
Genomic and cartography
GoldenPath hg38 (UCSC)PTENP1-AS  -     chr9:33677268-33688010 +  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PTENP1-AS  -     9p13.3   [Description]    (hg19-Feb_2009)
EnsemblPTENP1-AS - 9p13.3 [CytoView hg19]  PTENP1-AS - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIPTENP1-AS [Mapview hg19]  PTENP1-AS [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM665711 BX374997 HG975435
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PTENP1-AS
Cluster EST : UnigeneHs.598470 [ NCBI ]
CGAP (NCI)Hs.598470
Alternative Splicing GalleryENSG00000281128
Gene ExpressionPTENP1-AS [ NCBI-GEO ]   PTENP1-AS [ EBI - ARRAY_EXPRESS ]   PTENP1-AS [ SEEK ]   PTENP1-AS [ MEM ]
Gene Expression Viewer (FireBrowse)PTENP1-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101243555
GTEX Portal (Tissue expression)PTENP1-AS
Human Protein AtlasENSG00000281128-PTENP1-AS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTENP1-AS
DMDM Disease mutations101243555
Blocks (Seattle)PTENP1-AS
Human Protein Atlas [tissue]ENSG00000281128-PTENP1-AS [tissue]
Protein Interaction databases
FunCoupENSG00000281128
BioGRIDPTENP1-AS
STRING (EMBL)PTENP1-AS
ZODIACPTENP1-AS
Ontologies - Pathways
Huge Navigator PTENP1-AS [HugePedia]
snp3D : Map Gene to Disease101243555
BioCentury BCIQPTENP1-AS
ClinGenPTENP1-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101243555
Clinical trialPTENP1-AS
Miscellaneous
canSAR (ICR)PTENP1-AS (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTENP1-AS
EVEXPTENP1-AS
GoPubMedPTENP1-AS
iHOPPTENP1-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:20:33 CET 2017

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