Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PTER (phosphotriesterase related)

Identity

Alias (NCBI)HPHRP
RPR-1
HGNC (Hugo) PTER
LocusID (NCBI) 9317
Atlas_Id 72375
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 16436943 and ends at 16513745 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TTC14 (3q26.33) / PTER (10p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)PTER   9590
Cards
Entrez_Gene (NCBI)PTER    phosphotriesterase related
AliasesHPHRP; RPR-1
GeneCards (Weizmann)PTER
Ensembl hg19 (Hinxton)ENSG00000165983 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165983 [Gene_View]  ENSG00000165983 [Sequence]  chr10:16436943-16513745 [Contig_View]  PTER [Vega]
ICGC DataPortalENSG00000165983
TCGA cBioPortalPTER
AceView (NCBI)PTER
Genatlas (Paris)PTER
SOURCE (Princeton)PTER
Genetics Home Reference (NIH)PTER
Genomic and cartography
GoldenPath hg38 (UCSC)PTER  -     chr10:16436943-16513745 +  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PTER  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathPTER - 10p13 [CytoView hg19]  PTER - 10p13 [CytoView hg38]
ImmunoBaseENSG00000165983
Genome Data Viewer NCBIPTER [Mapview hg19]  
OMIM604446   
Gene and transcription
Genbank (Entrez)AF212237 AK095486 AK314910 AL119009 AW451393
RefSeq transcript (Entrez)NM_001001484 NM_001261836 NM_001261837 NM_001261838 NM_030664
Consensus coding sequences : CCDS (NCBI)PTER
Gene ExpressionPTER [ NCBI-GEO ]   PTER [ EBI - ARRAY_EXPRESS ]   PTER [ SEEK ]   PTER [ MEM ]
Gene Expression Viewer (FireBrowse)PTER [ Firebrowse - Broad ]
GenevisibleExpression of PTER in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9317
GTEX Portal (Tissue expression)PTER
Human Protein AtlasENSG00000165983-PTER [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BW5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BW5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BW5
Catalytic activity : Enzyme3.1.-.- [ Enzyme-Expasy ]   3.1.-.-3.1.-.- [ IntEnz-EBI ]   3.1.-.- [ BRENDA ]   3.1.-.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ96BW5
Domaine pattern : Prosite (Expaxy)PHOSPHOTRIESTERASE_1 (PS01322)    PHOSPHOTRIESTERASE_2 (PS51347)   
Domains : Interpro (EBI)AryldialkylPase_Zn-BS    Metal_Hydrolase    Phosphotriesterase   
Domain families : Pfam (Sanger)PTE (PF02126)   
Domain families : Pfam (NCBI)pfam02126   
Conserved Domain (NCBI)PTER
SuperfamilyQ96BW5
AlphaFold pdb e-kbQ96BW5   
Human Protein Atlas [tissue]ENSG00000165983-PTER [tissue]
HPRD16061
Protein Interaction databases
DIP (DOE-UCLA)Q96BW5
IntAct (EBI)Q96BW5
BioGRIDPTER
STRING (EMBL)PTER
ZODIACPTER
Ontologies - Pathways
QuickGOQ96BW5
Ontology : AmiGOmolecular_function  protein binding  zinc ion binding  catabolic process  hydrolase activity, acting on ester bonds  epithelial cell differentiation  extracellular exosome  
Ontology : EGO-EBImolecular_function  protein binding  zinc ion binding  catabolic process  hydrolase activity, acting on ester bonds  epithelial cell differentiation  extracellular exosome  
NDEx NetworkPTER
Atlas of Cancer Signalling NetworkPTER
Wikipedia pathwaysPTER
Orthology - Evolution
OrthoDB9317
GeneTree (enSembl)ENSG00000165983
Phylogenetic Trees/Animal Genes : TreeFamPTER
Homologs : HomoloGenePTER
Homology/Alignments : Family Browser (UCSC)PTER
Gene fusions - Rearrangements
Fusion : QuiverPTER
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPTER [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PTER
dbVarPTER
ClinVarPTER
MonarchPTER
1000_GenomesPTER 
Exome Variant ServerPTER
GNOMAD BrowserENSG00000165983
Varsome BrowserPTER
ACMGPTER variants
VarityQ96BW5
Genomic Variants (DGV)PTER [DGVbeta]
DECIPHERPTER [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPTER 
Mutations
ICGC Data PortalPTER 
TCGA Data PortalPTER 
Broad Tumor PortalPTER
OASIS PortalPTER [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPTER  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPTER
Mutations and Diseases : HGMDPTER
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaPTER
DgiDB (Drug Gene Interaction Database)PTER
DoCM (Curated mutations)PTER
CIViC (Clinical Interpretations of Variants in Cancer)PTER
Cancer3DPTER
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604446   
Orphanet
DisGeNETPTER
MedgenPTER
Genetic Testing Registry PTER
NextProtQ96BW5 [Medical]
GENETestsPTER
Target ValidationPTER
Huge Navigator PTER [HugePedia]
ClinGenPTER
Clinical trials, drugs, therapy
MyCancerGenomePTER
Protein Interactions : CTDPTER
Pharm GKB GenePA33944
PharosQ96BW5
Clinical trialPTER
Miscellaneous
canSAR (ICR)PTER
HarmonizomePTER
DataMed IndexPTER
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPTER
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:17:36 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.