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PTGES2-AS1 (PTGES2 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) PTGES2-AS1
LocusID (NCBI) 389791
Atlas_Id 72378
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 130890827 and ends at 130892907 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PTGES2-AS1   48711
Cards
Entrez_Gene (NCBI)PTGES2-AS1  389791  PTGES2 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)PTGES2-AS1
Ensembl hg19 (Hinxton)ENSG00000232850 [Gene_View]  chr9:130890827-130892907 [Contig_View]  PTGES2-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000232850 [Gene_View]  chr9:130890827-130892907 [Contig_View]  PTGES2-AS1 [Vega]
ICGC DataPortalENSG00000232850
TCGA cBioPortalPTGES2-AS1
AceView (NCBI)PTGES2-AS1
Genatlas (Paris)PTGES2-AS1
WikiGenes389791
SOURCE (Princeton)PTGES2-AS1
Genetics Home Reference (NIH)PTGES2-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)PTGES2-AS1  -     chr9:130890827-130892907 +  9q34.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PTGES2-AS1  -     9q34.11   [Description]    (hg38-Dec_2013)
EnsemblPTGES2-AS1 - 9q34.11 [CytoView hg19]  PTGES2-AS1 - 9q34.11 [CytoView hg38]
Mapping of homologs : NCBIPTGES2-AS1 [Mapview hg19]  PTGES2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094537 BC132745 BC132747 BC141829 BC151210
RefSeq transcript (Entrez)NM_001013652
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_012488 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)PTGES2-AS1
Cluster EST : UnigeneHs.632678 [ NCBI ]
CGAP (NCI)Hs.632678
Alternative Splicing GalleryENSG00000232850
Gene ExpressionPTGES2-AS1 [ NCBI-GEO ]   PTGES2-AS1 [ EBI - ARRAY_EXPRESS ]   PTGES2-AS1 [ SEEK ]   PTGES2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PTGES2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389791
GTEX Portal (Tissue expression)PTGES2-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1Y9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1Y9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1Y9
Splice isoforms : SwissVarQ8N1Y9
PhosPhoSitePlusQ8N1Y9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTGES2-AS1
DMDM Disease mutations389791
Blocks (Seattle)PTGES2-AS1
SuperfamilyQ8N1Y9
Human Protein AtlasENSG00000232850
Peptide AtlasQ8N1Y9
HPRD18396
IPIIPI00399130   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1Y9
IntAct (EBI)Q8N1Y9
FunCoupENSG00000232850
BioGRIDPTGES2-AS1
STRING (EMBL)PTGES2-AS1
ZODIACPTGES2-AS1
Ontologies - Pathways
QuickGOQ8N1Y9
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkPTGES2-AS1
Atlas of Cancer Signalling NetworkPTGES2-AS1
Wikipedia pathwaysPTGES2-AS1
Orthology - Evolution
OrthoDB389791
GeneTree (enSembl)ENSG00000232850
Phylogenetic Trees/Animal Genes : TreeFamPTGES2-AS1
HOVERGENQ8N1Y9
HOGENOMQ8N1Y9
Homologs : HomoloGenePTGES2-AS1
Homology/Alignments : Family Browser (UCSC)PTGES2-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPTGES2-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PTGES2-AS1
dbVarPTGES2-AS1
ClinVarPTGES2-AS1
1000_GenomesPTGES2-AS1 
Exome Variant ServerPTGES2-AS1
ExAC (Exome Aggregation Consortium)PTGES2-AS1 (select the gene name)
Genetic variants : HAPMAP389791
Genomic Variants (DGV)PTGES2-AS1 [DGVbeta]
DECIPHER (Syndromes)9:130890827-130892907  ENSG00000232850
CONAN: Copy Number AnalysisPTGES2-AS1 
Mutations
ICGC Data PortalPTGES2-AS1 
TCGA Data PortalPTGES2-AS1 
Broad Tumor PortalPTGES2-AS1
OASIS PortalPTGES2-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPTGES2-AS1
BioMutasearch PTGES2-AS1
DgiDB (Drug Gene Interaction Database)PTGES2-AS1
DoCM (Curated mutations)PTGES2-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PTGES2-AS1 (select a term)
intoGenPTGES2-AS1
Cancer3DPTGES2-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPTGES2-AS1
Genetic Testing Registry PTGES2-AS1
NextProtQ8N1Y9 [Medical]
TSGene389791
GENETestsPTGES2-AS1
Huge Navigator PTGES2-AS1 [HugePedia]
snp3D : Map Gene to Disease389791
BioCentury BCIQPTGES2-AS1
ClinGenPTGES2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389791
Clinical trialPTGES2-AS1
Miscellaneous
canSAR (ICR)PTGES2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTGES2-AS1
EVEXPTGES2-AS1
GoPubMedPTGES2-AS1
iHOPPTGES2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:40:10 CET 2017

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