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PTGES3L (prostaglandin E synthase 3 like)

Identity

Alias_namesprostaglandin E synthase 3 (cytosolic)-like
Other alias-
HGNC (Hugo) PTGES3L
LocusID (NCBI) 100885848
Atlas_Id 72379
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 42968088 and ends at 42980528 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PTGES3L (17q21.31) / AARSD1 (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PTGES3L   43943
Cards
Entrez_Gene (NCBI)PTGES3L  100885848  prostaglandin E synthase 3 like
Aliases
GeneCards (Weizmann)PTGES3L
Ensembl hg19 (Hinxton)ENSG00000267060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267060 [Gene_View]  chr17:42968088-42980528 [Contig_View]  PTGES3L [Vega]
ICGC DataPortalENSG00000267060
TCGA cBioPortalPTGES3L
AceView (NCBI)PTGES3L
Genatlas (Paris)PTGES3L
WikiGenes100885848
SOURCE (Princeton)PTGES3L
Genetics Home Reference (NIH)PTGES3L
Genomic and cartography
GoldenPath hg38 (UCSC)PTGES3L  -     chr17:42968088-42980528 -  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PTGES3L  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblPTGES3L - 17q21.31 [CytoView hg19]  PTGES3L - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIPTGES3L [Mapview hg19]  PTGES3L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056965 AK093402 BG776211 BU631064 DA900052
RefSeq transcript (Entrez)NM_001142653 NM_001142654 NM_001261430
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PTGES3L
Cluster EST : UnigeneHs.317403 [ NCBI ]
CGAP (NCI)Hs.317403
Alternative Splicing GalleryENSG00000267060
Gene ExpressionPTGES3L [ NCBI-GEO ]   PTGES3L [ EBI - ARRAY_EXPRESS ]   PTGES3L [ SEEK ]   PTGES3L [ MEM ]
Gene Expression Viewer (FireBrowse)PTGES3L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100885848
GTEX Portal (Tissue expression)PTGES3L
Protein : pattern, domain, 3D structure
UniProt/SwissProtE9PB15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtE9PB15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProE9PB15
Splice isoforms : SwissVarE9PB15
PhosPhoSitePlusE9PB15
Domaine pattern : Prosite (Expaxy)CS (PS51203)   
Domains : Interpro (EBI)CS_dom    HSP20-like_chaperone   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTGES3L
DMDM Disease mutations100885848
Blocks (Seattle)PTGES3L
SuperfamilyE9PB15
Human Protein AtlasENSG00000267060
Peptide AtlasE9PB15
Protein Interaction databases
DIP (DOE-UCLA)E9PB15
IntAct (EBI)E9PB15
FunCoupENSG00000267060
BioGRIDPTGES3L
STRING (EMBL)PTGES3L
ZODIACPTGES3L
Ontologies - Pathways
QuickGOE9PB15
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPTGES3L
Atlas of Cancer Signalling NetworkPTGES3L
Wikipedia pathwaysPTGES3L
Orthology - Evolution
OrthoDB100885848
GeneTree (enSembl)ENSG00000267060
Phylogenetic Trees/Animal Genes : TreeFamPTGES3L
HOVERGENE9PB15
HOGENOME9PB15
Homologs : HomoloGenePTGES3L
Homology/Alignments : Family Browser (UCSC)PTGES3L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPTGES3L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PTGES3L
dbVarPTGES3L
ClinVarPTGES3L
1000_GenomesPTGES3L 
Exome Variant ServerPTGES3L
ExAC (Exome Aggregation Consortium)PTGES3L (select the gene name)
Genetic variants : HAPMAP100885848
Genomic Variants (DGV)PTGES3L [DGVbeta]
DECIPHERPTGES3L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPTGES3L 
Mutations
ICGC Data PortalPTGES3L 
TCGA Data PortalPTGES3L 
Broad Tumor PortalPTGES3L
OASIS PortalPTGES3L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPTGES3L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPTGES3L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PTGES3L
DgiDB (Drug Gene Interaction Database)PTGES3L
DoCM (Curated mutations)PTGES3L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PTGES3L (select a term)
intoGenPTGES3L
Cancer3DPTGES3L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPTGES3L
Genetic Testing Registry PTGES3L
NextProtE9PB15 [Medical]
TSGene100885848
GENETestsPTGES3L
Target ValidationPTGES3L
Huge Navigator PTGES3L [HugePedia]
snp3D : Map Gene to Disease100885848
BioCentury BCIQPTGES3L
ClinGenPTGES3L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885848
Chemical/Pharm GKB GenePA166049103
Clinical trialPTGES3L
Miscellaneous
canSAR (ICR)PTGES3L (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTGES3L
EVEXPTGES3L
GoPubMedPTGES3L
iHOPPTGES3L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:36:50 CEST 2017

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