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PTP4A2 (protein tyrosine phosphatase 4A2)

Identity

Alias (NCBI)HH13
HH7-2
HU-PP-1
OV-1
PRL-2
PRL2
PTP4A
PTPCAAX2
ptp-IV1a
ptp-IV1b
HGNC (Hugo) PTP4A2
HGNC Alias symbHU-PP-1
PTPCAAX2
OV-1
ptp-IV1a
PRL-2
PRL2
HGNC Alias namephosphatase of regenerating liver 2
HGNC Previous namePTP4A
HGNC Previous nameprotein tyrosine phosphatase type IVA, member 2
LocusID (NCBI) 8073
Atlas_Id 41907
Location 1p35.2  [Link to chromosome band 1p35]
Location_base_pair Starts at 31906421 and ends at 31938368 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BRK1 (3p25.3) / PTP4A2 (1p35.2)PTP4A2 (1p35.2) / CLDN16 (3q28)PTP4A2 (1p35.2) / MALAT1 (11q13.1)
cytochrome_b () / PTP4A2 (1p35.2)BRK1 3p25.3 / PTP4A2 1p35.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)PTP4A2   9635
Cards
Entrez_Gene (NCBI)PTP4A2    protein tyrosine phosphatase 4A2
AliasesHH13; HH7-2; HU-PP-1; OV-1; 
PRL-2; PRL2; PTP4A; PTPCAAX2; ptp-IV1a; ptp-IV1b
GeneCards (Weizmann)PTP4A2
Ensembl hg19 (Hinxton)ENSG00000184007 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184007 [Gene_View]  ENSG00000184007 [Sequence]  chr1:31906421-31938368 [Contig_View]  PTP4A2 [Vega]
ICGC DataPortalENSG00000184007
TCGA cBioPortalPTP4A2
AceView (NCBI)PTP4A2
Genatlas (Paris)PTP4A2
SOURCE (Princeton)PTP4A2
Genetics Home Reference (NIH)PTP4A2
Genomic and cartography
GoldenPath hg38 (UCSC)PTP4A2  -     chr1:31906421-31938368 -  1p35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PTP4A2  -     1p35.2   [Description]    (hg19-Feb_2009)
GoldenPathPTP4A2 - 1p35.2 [CytoView hg19]  PTP4A2 - 1p35.2 [CytoView hg38]
ImmunoBaseENSG00000184007
Genome Data Viewer NCBIPTP4A2 [Mapview hg19]  
OMIM601584   
Gene and transcription
Genbank (Entrez)AF208850 AK129578 AK292703 AK297280 BC018662
RefSeq transcript (Entrez)NM_001195100 NM_001195101 NM_001369858 NM_001369859 NM_001369860 NM_003479 NM_080391 NM_080392
Consensus coding sequences : CCDS (NCBI)PTP4A2
Gene ExpressionPTP4A2 [ NCBI-GEO ]   PTP4A2 [ EBI - ARRAY_EXPRESS ]   PTP4A2 [ SEEK ]   PTP4A2 [ MEM ]
Gene Expression Viewer (FireBrowse)PTP4A2 [ Firebrowse - Broad ]
GenevisibleExpression of PTP4A2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8073
GTEX Portal (Tissue expression)PTP4A2
Human Protein AtlasENSG00000184007-PTP4A2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTP4A2
Human Protein Atlas [tissue]ENSG00000184007-PTP4A2 [tissue]
HPRD03348
Protein Interaction databases
BioGRIDPTP4A2
STRING (EMBL)PTP4A2
ZODIACPTP4A2
Ontologies - Pathways
Litterature
PubMed50 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXPTP4A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:27:28 CEST 2021

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