PTPLA (protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A)

Identity

Other names	CAP
HGNC	PTPLA
Location	10p14-p13
Location_base_pair	Starts at 17671964 and ends at 17699379 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PTPLA   9639
Entrez_Gene	PTPLA  9200  protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A
	Cards
GeneCards	PTPLA
Ensembl	PTPLA [Search_View]   ENSG00000165996 [Gene_View]
Genatlas	PTPLA
GeneLynx	PTPLA
eGenome	PTPLA
euGene	9200
	Genomic and cartography
GoldenPath	PTPLA  -     chr10:17671964-17699379 -  10p12.33   [Description]    (hg18-March_2006)
Ensembl	PTPLA - 10p12.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PTPLA
	Gene and transcription
Genbank	AF114494 [ ENTREZ ]
Genbank	AW022173 [ ENTREZ ]
Genbank	AY455942 [ ENTREZ ]
Genbank	BC010353 [ ENTREZ ]
Genbank	BC027709 [ ENTREZ ]
RefSeq	NM_014241 [ SRS ]    NM_014241 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	PTPLA AceView - NCBI
Unigene	Hs.114062 [ SRS ]    Hs.114062 [ NCBI ]     HS114062 [ spliceNest ]
Fast-db	4512 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6JIC5 [ SRS]    Q6JIC5 [ EXPASY ]     Q6JIC5 [ INTERPRO ]     Q6JIC5 [ UNIPROT ]
Prosite	PS00296 CHAPERONINS_CPN60 [ SRS ]    PS00296 CHAPERONINS_CPN60 [ Expasy ]
Interpro	IPR001844 Chaprnin_Cpn60 [ SRS ]    IPR001844 Chaprnin_Cpn60 [ EBI ]
Interpro	IPR007482 Tyr_Pase-like_PTPLA [ SRS ]    IPR007482 Tyr_Pase-like_PTPLA [ EBI ]
CluSTr	Q6JIC5
Blocks	Q6JIC5
HPRD	10175
	Protein Interaction databases
DIP	Q6JIC5
IntAct	Q6JIC5
	Polymorphism : SNP, mutations, diseases
OMIM	610467    [ map ]
GENECLINICS	610467
SNP	PTPLA [dbSNP-NCBI]
SNP	NM_014241 [SNP-NCI]
SNP	PTPLA [GeneSNPs - Utah]  PTPLA] [HGBASE - SRS]
HAPMAP	PTPLA [HAPMAP]
COSMIC	PTPLA [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PTPLA
	General knowledge
Family Browser	PTPLA [UCSC Family Browser]
SOURCE	NM_014241
SMD	Hs.114062
SAGE	Hs.114062
GO	protein tyrosine phosphatase activity [Amigo]  protein tyrosine phosphatase activity
GO	protein tyrosine phosphatase activity [Amigo]  protein tyrosine phosphatase activity
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	protein amino acid dephosphorylation [Amigo]  protein amino acid dephosphorylation
GO	signal transduction [Amigo]  signal transduction
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	dephosphorylation [Amigo]  dephosphorylation
GO	phosphatase activity [Amigo]  phosphatase activity
GO	cellular protein metabolic process [Amigo]  cellular protein metabolic process
BIOCARTA	How Progesterone Initiates the Oocyte Maturation    [Genes]
PubGene	PTPLA
TreeFam	PTPLA
CTD	9200 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PTPLA Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:28:09 2008