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PTPRD-AS1 (PTPRD antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) PTPRD-AS1
LocusID (NCBI) 101929407
Atlas_Id 72390
Location 9p24.1  [Link to chromosome band 9p24]
Location_base_pair Starts at 8858018 and ends at 8861727 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PTPRD-AS1   49753
Cards
Entrez_Gene (NCBI)PTPRD-AS1  101929407  PTPRD antisense RNA 1
Aliases
GeneCards (Weizmann)PTPRD-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chr9:8858018-8861727 [Contig_View]  PTPRD-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:8858018-8861727 [Contig_View]  PTPRD-AS1 [Vega]
TCGA cBioPortalPTPRD-AS1
AceView (NCBI)PTPRD-AS1
Genatlas (Paris)PTPRD-AS1
WikiGenes101929407
SOURCE (Princeton)PTPRD-AS1
Genetics Home Reference (NIH)PTPRD-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)PTPRD-AS1  -     chr9:8858018-8861727 +  9p24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PTPRD-AS1  -     9p24.1   [Description]    (hg38-Dec_2013)
EnsemblPTPRD-AS1 - 9p24.1 [CytoView hg19]  PTPRD-AS1 - 9p24.1 [CytoView hg38]
Mapping of homologs : NCBIPTPRD-AS1 [Mapview hg19]  PTPRD-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094342 DA788948 DB495850 DB541705 HG501886
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_033963 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)PTPRD-AS1
Cluster EST : UnigeneHs.649971 [ NCBI ]
CGAP (NCI)Hs.649971
Gene ExpressionPTPRD-AS1 [ NCBI-GEO ]   PTPRD-AS1 [ EBI - ARRAY_EXPRESS ]   PTPRD-AS1 [ SEEK ]   PTPRD-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)PTPRD-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929407
GTEX Portal (Tissue expression)PTPRD-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PTPRD-AS1
DMDM Disease mutations101929407
Blocks (Seattle)PTPRD-AS1
Protein Interaction databases
BioGRIDPTPRD-AS1
STRING (EMBL)PTPRD-AS1
ZODIACPTPRD-AS1
Ontologies - Pathways
Huge Navigator PTPRD-AS1 [HugePedia]
snp3D : Map Gene to Disease101929407
BioCentury BCIQPTPRD-AS1
ClinGenPTPRD-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929407
Clinical trialPTPRD-AS1
Miscellaneous
canSAR (ICR)PTPRD-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTPRD-AS1
EVEXPTPRD-AS1
GoPubMedPTPRD-AS1
iHOPPTPRD-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:40:12 CET 2017

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