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PTTG3P (pituitary tumor-transforming 3, pseudogene)

Identity

Alias_namesPTTG3
pituitary tumor-transforming 3
Other aliasrcPTTG1
HGNC (Hugo) PTTG3P
LocusID (NCBI) 26255
Atlas_Id 51068
Location 8q13.1  [Link to chromosome band 8q13]
Location_base_pair Starts at 66767334 and ends at 66768034 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PTTG3P   13422
Cards
Entrez_Gene (NCBI)PTTG3P  26255  pituitary tumor-transforming 3, pseudogene
AliasesPTTG3; rcPTTG1
GeneCards (Weizmann)PTTG3P
Ensembl hg19 (Hinxton)ENSG00000213005 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213005 [Gene_View]  chr8:66767334-66768034 [Contig_View]  PTTG3P [Vega]
ICGC DataPortalENSG00000213005
TCGA cBioPortalPTTG3P
AceView (NCBI)PTTG3P
Genatlas (Paris)PTTG3P
WikiGenes26255
SOURCE (Princeton)PTTG3P
Genetics Home Reference (NIH)PTTG3P
Genomic and cartography
GoldenPath hg38 (UCSC)PTTG3P  -     chr8:66767334-66768034 -  8q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PTTG3P  -     8q13.1   [Description]    (hg19-Feb_2009)
EnsemblPTTG3P - 8q13.1 [CytoView hg19]  PTTG3P - 8q13.1 [CytoView hg38]
Mapping of homologs : NCBIPTTG3P [Mapview hg19]  PTTG3P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF095289
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PTTG3P
Cluster EST : UnigeneHs.647156 [ NCBI ]
CGAP (NCI)Hs.647156
Alternative Splicing GalleryENSG00000213005
Gene ExpressionPTTG3P [ NCBI-GEO ]   PTTG3P [ EBI - ARRAY_EXPRESS ]   PTTG3P [ SEEK ]   PTTG3P [ MEM ]
Gene Expression Viewer (FireBrowse)PTTG3P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26255
GTEX Portal (Tissue expression)PTTG3P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZH4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZH4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZH4
Splice isoforms : SwissVarQ9NZH4
PhosPhoSitePlusQ9NZH4
Domains : Interpro (EBI)Securin_separation_inhibitor   
Domain families : Pfam (Sanger)Securin (PF04856)   
Domain families : Pfam (NCBI)pfam04856   
Conserved Domain (NCBI)PTTG3P
DMDM Disease mutations26255
Blocks (Seattle)PTTG3P
SuperfamilyQ9NZH4
Human Protein AtlasENSG00000213005
Peptide AtlasQ9NZH4
IPIIPI00025808   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZH4
IntAct (EBI)Q9NZH4
FunCoupENSG00000213005
BioGRIDPTTG3P
STRING (EMBL)PTTG3P
ZODIACPTTG3P
Ontologies - Pathways
QuickGOQ9NZH4
Ontology : AmiGOnucleus  cytoplasm  regulation of transcription, DNA-templated  negative regulation of peptidase activity  SH3 domain binding  peptidase inhibitor activity  homologous chromosome segregation  chromosome organization  
Ontology : EGO-EBInucleus  cytoplasm  regulation of transcription, DNA-templated  negative regulation of peptidase activity  SH3 domain binding  peptidase inhibitor activity  homologous chromosome segregation  chromosome organization  
NDEx NetworkPTTG3P
Atlas of Cancer Signalling NetworkPTTG3P
Wikipedia pathwaysPTTG3P
Orthology - Evolution
OrthoDB26255
GeneTree (enSembl)ENSG00000213005
Phylogenetic Trees/Animal Genes : TreeFamPTTG3P
HOVERGENQ9NZH4
HOGENOMQ9NZH4
Homologs : HomoloGenePTTG3P
Homology/Alignments : Family Browser (UCSC)PTTG3P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPTTG3P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PTTG3P
dbVarPTTG3P
ClinVarPTTG3P
1000_GenomesPTTG3P 
Exome Variant ServerPTTG3P
ExAC (Exome Aggregation Consortium)PTTG3P (select the gene name)
Genetic variants : HAPMAP26255
Genomic Variants (DGV)PTTG3P [DGVbeta]
DECIPHERPTTG3P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPTTG3P 
Mutations
ICGC Data PortalPTTG3P 
TCGA Data PortalPTTG3P 
Broad Tumor PortalPTTG3P
OASIS PortalPTTG3P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPTTG3P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PTTG3P
DgiDB (Drug Gene Interaction Database)PTTG3P
DoCM (Curated mutations)PTTG3P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PTTG3P (select a term)
intoGenPTTG3P
Cancer3DPTTG3P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPTTG3P
Genetic Testing Registry PTTG3P
NextProtQ9NZH4 [Medical]
TSGene26255
GENETestsPTTG3P
Target ValidationPTTG3P
Huge Navigator PTTG3P [HugePedia]
snp3D : Map Gene to Disease26255
BioCentury BCIQPTTG3P
ClinGenPTTG3P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26255
Chemical/Pharm GKB GenePA134988136
Clinical trialPTTG3P
Miscellaneous
canSAR (ICR)PTTG3P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePTTG3P
EVEXPTTG3P
GoPubMedPTTG3P
iHOPPTTG3P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:12:09 CEST 2017

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