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PUDP (pseudouridine 5'-phosphatase)

Identity

Alias_namesFAM16AX
HDHD1A
HDHD1
family with sequence similarity 16, member A, X-linked
haloacid dehalogenase-like hydrolase domain containing 1A
haloacid dehalogenase-like hydrolase domain containing 1
Alias_symbol (synonym)DXF68S1E
GS1
Other alias
HGNC (Hugo) PUDP
LocusID (NCBI) 8226
Atlas_Id 77804
Location Xp22.31  [Link to chromosome band Xp22]
Location_base_pair Starts at 6966961 and ends at 7066231 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PUDP   16818
Cards
Entrez_Gene (NCBI)PUDP  8226  pseudouridine 5'-phosphatase
AliasesDXF68S1E; FAM16AX; GS1; HDHD1; 
HDHD1A
GeneCards (Weizmann)PUDP
Ensembl hg19 (Hinxton)ENSG00000130021 [Gene_View]  chrX:6966961-7066231 [Contig_View]  PUDP [Vega]
Ensembl hg38 (Hinxton)ENSG00000130021 [Gene_View]  chrX:6966961-7066231 [Contig_View]  PUDP [Vega]
ICGC DataPortalENSG00000130021
TCGA cBioPortalPUDP
AceView (NCBI)PUDP
Genatlas (Paris)PUDP
WikiGenes8226
SOURCE (Princeton)PUDP
Genetics Home Reference (NIH)PUDP
Genomic and cartography
GoldenPath hg19 (UCSC)PUDP  -     chrX:6966961-7066231 -  Xp22.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PUDP  -     Xp22.31   [Description]    (hg38-Dec_2013)
EnsemblPUDP - Xp22.31 [CytoView hg19]  PUDP - Xp22.31 [CytoView hg38]
Mapping of homologs : NCBIPUDP [Mapview hg19]  PUDP [Mapview hg38]
OMIM306480   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001135565 NM_001178135 NM_001178136 NM_012080
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_021256 NT_167197 NW_004929438
Consensus coding sequences : CCDS (NCBI)PUDP
Cluster EST : UnigeneHs.185910 [ NCBI ]
CGAP (NCI)Hs.185910
Alternative Splicing GalleryENSG00000130021
Gene ExpressionPUDP [ NCBI-GEO ]   PUDP [ EBI - ARRAY_EXPRESS ]   PUDP [ SEEK ]   PUDP [ MEM ]
Gene Expression Viewer (FireBrowse)PUDP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)8226
GTEX Portal (Tissue expression)PUDP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PUDP
DMDM Disease mutations8226
Blocks (Seattle)PUDP
Human Protein AtlasENSG00000130021
HPRD02383
IPIIPI00302436   IPI00908643   IPI01013783   IPI00922433   IPI00913889   
Protein Interaction databases
FunCoupENSG00000130021
BioGRIDPUDP
STRING (EMBL)PUDP
ZODIACPUDP
Ontologies - Pathways
Huge Navigator PUDP [HugePedia]
snp3D : Map Gene to Disease8226
BioCentury BCIQPUDP
ClinGenPUDP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8226
Chemical/Pharm GKB GenePA165756731
Clinical trialPUDP
Miscellaneous
canSAR (ICR)PUDP (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePUDP
EVEXPUDP
GoPubMedPUDP
iHOPPUDP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:40:14 CET 2017

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