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PURG (purine-rich element binding protein G)

Identity

Alias_symbol (synonym)PURG-A
PURG-B
Other alias
HGNC (Hugo) PURG
LocusID (NCBI) 29942
Atlas_Id 54564
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 30853318 and ends at 30891231 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PPP2CB (8p12) / PURG (8p12)PURG (8p12) / PURG (8p12)PURG (8p12) / UBAP1 (9p13.3)
UBAP1 (9p13.3) / PURG (8p12)PPP2CB 8p12 / PURG 8p12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)PURG   17930
Cards
Entrez_Gene (NCBI)PURG  29942  purine-rich element binding protein G
AliasesPURG-A; PURG-B
GeneCards (Weizmann)PURG
Ensembl hg19 (Hinxton)ENSG00000172733 [Gene_View]  chr8:30853318-30891231 [Contig_View]  PURG [Vega]
Ensembl hg38 (Hinxton)ENSG00000172733 [Gene_View]  chr8:30853318-30891231 [Contig_View]  PURG [Vega]
ICGC DataPortalENSG00000172733
TCGA cBioPortalPURG
AceView (NCBI)PURG
Genatlas (Paris)PURG
WikiGenes29942
SOURCE (Princeton)PURG
Genetics Home Reference (NIH)PURG
Genomic and cartography
GoldenPath hg19 (UCSC)PURG  -     chr8:30853318-30891231 -  8p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PURG  -     8p12   [Description]    (hg38-Dec_2013)
EnsemblPURG - 8p12 [CytoView hg19]  PURG - 8p12 [CytoView hg38]
Mapping of homologs : NCBIPURG [Mapview hg19]  PURG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF195513 AW170055 AY077841 BC106708
RefSeq transcript (Entrez)NM_001015508 NM_013357
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)PURG
Cluster EST : UnigeneHs.373778 [ NCBI ]
CGAP (NCI)Hs.373778
Alternative Splicing GalleryENSG00000172733
Gene ExpressionPURG [ NCBI-GEO ]   PURG [ EBI - ARRAY_EXPRESS ]   PURG [ SEEK ]   PURG [ MEM ]
Gene Expression Viewer (FireBrowse)PURG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29942
GTEX Portal (Tissue expression)PURG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJV8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJV8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJV8
Splice isoforms : SwissVarQ9UJV8
PhosPhoSitePlusQ9UJV8
Domains : Interpro (EBI)PUR-bd_fam    PURgamma   
Domain families : Pfam (Sanger)PurA (PF04845)   
Domain families : Pfam (NCBI)pfam04845   
Domain families : Smart (EMBL)PUR (SM00712)  
Conserved Domain (NCBI)PURG
DMDM Disease mutations29942
Blocks (Seattle)PURG
SuperfamilyQ9UJV8
Human Protein AtlasENSG00000172733
Peptide AtlasQ9UJV8
HPRD17933
IPIIPI00002534   IPI00383017   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJV8
IntAct (EBI)Q9UJV8
FunCoupENSG00000172733
BioGRIDPURG
STRING (EMBL)PURG
ZODIACPURG
Ontologies - Pathways
QuickGOQ9UJV8
Ontology : AmiGODNA binding  nucleus  poly(A) RNA binding  
Ontology : EGO-EBIDNA binding  nucleus  poly(A) RNA binding  
NDEx NetworkPURG
Atlas of Cancer Signalling NetworkPURG
Wikipedia pathwaysPURG
Orthology - Evolution
OrthoDB29942
GeneTree (enSembl)ENSG00000172733
Phylogenetic Trees/Animal Genes : TreeFamPURG
HOVERGENQ9UJV8
HOGENOMQ9UJV8
Homologs : HomoloGenePURG
Homology/Alignments : Family Browser (UCSC)PURG
Gene fusions - Rearrangements
Fusion : MitelmanPURG/UBAP1 [8p12/9p13.3]  
Fusion : MitelmanUBAP1/PURG [9p13.3/8p12]  [t(8;9)(p12;p13)]  
Fusion: TCGAPPP2CB 8p12 PURG 8p12 BRCA OV
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPURG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PURG
dbVarPURG
ClinVarPURG
1000_GenomesPURG 
Exome Variant ServerPURG
ExAC (Exome Aggregation Consortium)PURG (select the gene name)
Genetic variants : HAPMAP29942
Genomic Variants (DGV)PURG [DGVbeta]
DECIPHER (Syndromes)8:30853318-30891231  ENSG00000172733
CONAN: Copy Number AnalysisPURG 
Mutations
ICGC Data PortalPURG 
TCGA Data PortalPURG 
Broad Tumor PortalPURG
OASIS PortalPURG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPURG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPURG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PURG
DgiDB (Drug Gene Interaction Database)PURG
DoCM (Curated mutations)PURG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PURG (select a term)
intoGenPURG
Cancer3DPURG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPURG
Genetic Testing Registry PURG
NextProtQ9UJV8 [Medical]
TSGene29942
GENETestsPURG
Huge Navigator PURG [HugePedia]
snp3D : Map Gene to Disease29942
BioCentury BCIQPURG
ClinGenPURG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29942
Chemical/Pharm GKB GenePA134879671
Clinical trialPURG
Miscellaneous
canSAR (ICR)PURG (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePURG
EVEXPURG
GoPubMedPURG
iHOPPURG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:16:19 CEST 2017

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